FFCP PHASE1:Hg19::chr11:10616289..10616293,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:10616289..10616293,+ | |||
|description=CAGE_peak_at_chr11:10616289..10616293,+ | |description=CAGE_peak_at_chr11:10616289..10616293,+ | ||
|id=chr11:10616289..10616293,+ | |id=chr11:10616289..10616293,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.49e-26!43;CL:0000066!4.92e-21!254;CL:0000223!4.93e-20!59;CL:0002368!1.21e-17!13;CL:0002202!1.36e-10!9;CL:0002632!1.36e-10!9;CL:0002536!1.38e-08!2;CL:0001014!1.80e-08!2;CL:0001016!1.80e-08!2;CL:0002251!1.60e-07!21 | |ontology_enrichment_celltype=CL:0002076!3.49e-26!43;CL:0000066!4.92e-21!254;CL:0000223!4.93e-20!59;CL:0002368!1.21e-17!13;CL:0002202!1.36e-10!9;CL:0002632!1.36e-10!9;CL:0002536!1.38e-08!2;CL:0001014!1.80e-08!2;CL:0001016!1.80e-08!2;CL:0002251!1.60e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.21e-11;13!CL:0002535;6.42e-09;2!CL:0002202;8.89e-08;9!CL:0002632;8.89e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.79e-11,13;CL:0002535,5.49e-09,2;CL:0002202,7.77e-08,9;CL:0002632,7.77e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;6.42e-09;2!UBERON:0010056;6.42e-09;2 | |||
|ontology_enrichment_disease=DOID:1749!7.14e-17!14;DOID:305!1.43e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.71e-18;14!DOID:3151;1.65e-16;1!DOID:3111;1.65e-16;1!DOID:3149;1.65e-16;1!DOID:3603;1.65e-16;1!DOID:4362;2.85e-13;5!DOID:3451;6.42e-09;2!DOID:4159;6.42e-09;2!DOID:0060122;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.71e-18,14;DOID:3111,1.93e-16,1;DOID:3603,1.93e-16,1;DOID:3151,3.07e-16,1;DOID:3149,3.07e-16,1;DOID:4362,2.68e-13,5;DOID:3451,8.74e-09,2;DOID:4159,8.74e-09,2;DOID:0060122,8.74e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.35e-12!5;UBERON:0000344!1.35e-10!12;UBERON:0003343!2.72e-09!4;UBERON:0004785!2.72e-09!4;UBERON:0003100!7.75e-09!41;UBERON:0001004!3.77e-07!72;UBERON:0000161!8.51e-07!35;UBERON:0004119!9.52e-07!169;UBERON:0000925!9.52e-07!169;UBERON:0006595!9.52e-07!169 | |ontology_enrichment_uberon=UBERON:0003729!3.35e-12!5;UBERON:0000344!1.35e-10!12;UBERON:0003343!2.72e-09!4;UBERON:0004785!2.72e-09!4;UBERON:0003100!7.75e-09!41;UBERON:0001004!3.77e-07!72;UBERON:0000161!8.51e-07!35;UBERON:0004119!9.52e-07!169;UBERON:0000925!9.52e-07!169;UBERON:0006595!9.52e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;3.22e-11;6!UBERON:0001560;3.22e-11;6!UBERON:0006955;6.42e-09;2!UBERON:0004801;6.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,3.06e-11,6;UBERON:0001560,3.06e-11,6;UBERON:0006955,5.49e-09,2;UBERON:0004801,5.49e-09,2;UBERON:0000065,4.08e-07,54 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,1.27612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,1.61119057208048,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,2.09135616417905,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.783939179315021,1.56706571844725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,1.0063040627978,0,0,0,0,2.68681276247223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0.172214979660816,0,0,1.53867458491389,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0,0.550285795565037,1.03973099535304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,3.52894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:10616289..10616293,+ | |short_description=p@chr11:10616289..10616293,+ | ||
}} | }} |
Latest revision as of 17:45, 23 July 2015
Short description: | p@chr11:10616289..10616293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:10616289..10616293, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.79e-11 | 13 |
epithelial cell of cervix | 5.49e-09 | 2 |
epithelial cell of tracheobronchial tree | 7.77e-08 | 9 |
epithelial cell of lower respiratory tract | 7.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 3.06e-11 | 6 |
neck of organ | 3.06e-11 | 6 |
uterine epithelium | 5.49e-09 | 2 |
cervix epithelium | 5.49e-09 | 2 |
respiratory tract | 4.08e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.71e-18 | 14 |
cystadenocarcinoma | 1.93e-16 | 1 |
mucinous cystadenocarcinoma | 1.93e-16 | 1 |
skin squamous cell carcinoma | 3.07e-16 | 1 |
keratoacanthoma | 3.07e-16 | 1 |
cervical cancer | 2.68e-13 | 5 |
skin carcinoma | 8.74e-09 | 2 |
skin cancer | 8.74e-09 | 2 |
integumentary system cancer | 8.74e-09 | 2 |