FFCP PHASE1:Hg19::chr11:113945540..113945542,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:113945540..113945542,- | |||
|description=CAGE_peak_at_chr11:113945540..113945542,- | |description=CAGE_peak_at_chr11:113945540..113945542,- | ||
|id=chr11:113945540..113945542,- | |id=chr11:113945540..113945542,- | ||
|ontology_enrichment_celltype=CL:0000012!2.66e-09!682;CL:0000548!3.32e-09!679;CL:0000004!3.32e-09!679;CL:0000255!3.32e-09!679;CL:0000003!2.03e-08!722 | |ontology_enrichment_celltype=CL:0000012!2.66e-09!682;CL:0000548!3.32e-09!679;CL:0000004!3.32e-09!679;CL:0000255!3.32e-09!679;CL:0000003!2.03e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0002588;2.68e-14;2!CL:0000746;3.98e-10;3!CL:0002616;5.39e-08;1!CL:0000737;8.40e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,3.09e-14,2;CL:0000746,4.00e-10,3;CL:0000513,4.00e-10,3;CL:0002616,2.90e-08,1;CL:0000737,8.42e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000513;3.98e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,2.00146596706261,0,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,1.23852898652861,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.709446689665756,0,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,0.898893937780338,0.612167784741805,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0.56738522469114,1.86846674698672,0,0,0.65156653411535,0,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,1.52909291250092,0,0,0.790152254325231,0,0.393010762749165,0,0.668745981562712,0,0,0,0.445641827540694,0,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,2.01210257911091,1.40648818027883,0.722878304769133,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0,0,0.275118041940067,0.208994966536811,0,0,0,2.01414658554573,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0,0.808264032418128,0,0.454072282934794,0.576175924479999,0,0,0.570471821544449,0,0.352303495931295,0.323745888736263,0.280901613404497,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.919463387397059,0.600952235626387,0,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.618315175430633,0.257640540045629,0.558350568994769,0.337552664482532,0.779496041289589,0.504867548488229,0,1.45481451136931,0,0.403008392910561,0.169560592310488,0,0,0,0.731842236777572,0.265059536642971,0,0.621966330092223,1.26160425437814,0,1.56449532329816,0.643240938192885,0,0,2.88751792667834,0,0.337169380156203,0,0.330881918197182,0.653638332277218,0.237270619111097,0,0.784885860501384,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0,0.939269553886573,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.75745460055828,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,0,1.89885516589815,0.415941723061614,0.356857977594324,0.630809660135739,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.460385919864187,1.12264037773229,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.241718899183244,0.40101294060657,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0.580066775656914,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0,2.78907329578371,0,0,0,0,0.869932992075073,0.37064843820784,0.715624433709956,0,0,0,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,1.00387946542836,1.76848273823618,0,0,0,0.987884678879706,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.846694330895531,1.62310970137278,0,0,0.783399478865116,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,1.44999915086959,0.568967241427498,0,0.472775363535873,0,0.583209226766509,0.520874984799877,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0,0.31900115973192,0.732780747214898,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0.392125068635479,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0.114536596165916,0,0,0.372757606696298,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0.643012593860077,0.137539436597234,0.83088067605837,0.449947783103001,0,0,0.670869375198532,0.0788057072991982,0,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0,0.592834895693833,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0.467426619694449,0,0.568209015825267,0.251567901752575,0,0.457680136793847,0.302461847526478,0.621748802331122,0.591420599958536,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.453411851024545,0.694567422971502,0,0.179088841081487,0.308801447160972,0.657852148736121,0,0.771656153083659,0.168942440653073,0,0.690860683462397,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0.979156554036111,0,0,0,0.471797825567689,0,0.33946505990805,0.212574920101683,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.62164849248911,0,0,0,0.118332000730565,0.0852134047591577,0,0,0.62041277132864,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0.198950775161368,0.356760272332706,0.22589216407792,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,1.29787968637137,0.504665699340316,0.109265571963696,0.380095503034311,0.713921808193872,0.534434810531121,0.275684698604535,0,0,0,0,0,0,0,0.258355639344024,0,0.112131862580613,0.190941474834495,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0.269475606319761,0,0.977931553462932,0,0,0,0.320568492303233 | |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,2.00146596706261,0,1.74467704820074,0,1.26343974685366,0.261185628199839,0,0,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,1.23852898652861,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.426507697462265,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0.709446689665756,0,0.645484683583826,1.35426486594342,0.376484679085209,1.36453075028923,0.898893937780338,0.612167784741805,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0.56738522469114,1.86846674698672,0,0,0.65156653411535,0,0.736555271975129,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,1.52909291250092,0,0,0.790152254325231,0,0.393010762749165,0,0.668745981562712,0,0,0,0.445641827540694,0,0.443067789167242,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.535081656179426,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,2.01210257911091,1.40648818027883,0.722878304769133,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0,0,0.275118041940067,0.208994966536811,0,0,0,2.01414658554573,0,0.24406205754817,0.735326160691737,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0,0.808264032418128,0,0.454072282934794,0.576175924479999,0,0,0.570471821544449,0,0.352303495931295,0.323745888736263,0.280901613404497,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.919463387397059,0.600952235626387,0,0.358779271377724,0.427114777637135,0.211931901159562,0.600182192168805,0.618315175430633,0.257640540045629,0.558350568994769,0.337552664482532,0.779496041289589,0.504867548488229,0,1.45481451136931,0,0.403008392910561,0.169560592310488,0,0,0,0.731842236777572,0.265059536642971,0,0.621966330092223,1.26160425437814,0,1.56449532329816,0.643240938192885,0,0,2.88751792667834,0,0.337169380156203,0,0.330881918197182,0.653638332277218,0.237270619111097,0,0.784885860501384,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0,0.939269553886573,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0.75745460055828,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.257207374262142,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,0,1.89885516589815,0.415941723061614,0.356857977594324,0.630809660135739,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0,0.195801157462741,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,0.460385919864187,1.12264037773229,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.464841513839837,0.241718899183244,0.40101294060657,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.510281115829547,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.275673144969061,0,0.580066775656914,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0,2.78907329578371,0,0,0,0,0.869932992075073,0.37064843820784,0.715624433709956,0,0,0,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,1.00387946542836,1.76848273823618,0,0,0,0.987884678879706,0,0,0.288666338176536,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.846694330895531,1.62310970137278,0,0,0.783399478865116,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,0,0,0,0.37428108081644,0.146508179271894,0.121360521749513,0,0.568272293612826,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0.222617410045812,0.16480387422676,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,1.44999915086959,0.568967241427498,0,0.472775363535873,0,0.583209226766509,0.520874984799877,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.230850775511391,0,0.23056390438806,0,0,0.31900115973192,0.732780747214898,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0.392125068635479,0,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0,0,0.176512253383001,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.288180834308212,0.114536596165916,0,0,0.372757606696298,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0.169346664131569,0,0,0.643012593860077,0.137539436597234,0.83088067605837,0.449947783103001,0,0,0.670869375198532,0.0788057072991982,0,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0.314408610199332,0,0,0.592834895693833,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0.467426619694449,0,0.568209015825267,0.251567901752575,0,0.457680136793847,0.302461847526478,0.621748802331122,0.591420599958536,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.545545977607678,0.107410557042488,0.928067519756987,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0.453411851024545,0.694567422971502,0,0.179088841081487,0.308801447160972,0.657852148736121,0,0.771656153083659,0.168942440653073,0,0.690860683462397,0,0,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0.979156554036111,0,0,0,0.471797825567689,0,0.33946505990805,0.212574920101683,0.123935764259002,0,0.318004350653419,0.0788617450012534,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0.62164849248911,0,0,0,0.118332000730565,0.0852134047591577,0,0,0.62041277132864,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0.198950775161368,0.356760272332706,0.22589216407792,0.109940516745429,0,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,1.29787968637137,0.504665699340316,0.109265571963696,0.380095503034311,0.713921808193872,0.534434810531121,0.275684698604535,0,0,0,0,0,0,0,0.258355639344024,0,0.112131862580613,0.190941474834495,0.202117188958219,0,0,0,0.143444410785353,0,0.0814032686109745,0.106727345877715,0,0.269475606319761,0,0.977931553462932,0,0,0,0.320568492303233 | ||
|short_description=p@chr11:113945540..113945542,- | |short_description=p@chr11:113945540..113945542,- | ||
}} | }} |
Latest revision as of 18:21, 23 July 2015
Short description: | p@chr11:113945540..113945542, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:113945540..113945542, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 3.09e-14 | 2 |
cardiac muscle cell | 4.00e-10 | 3 |
cardiac muscle myoblast | 4.00e-10 | 3 |
perirenal adipocyte cell | 2.90e-08 | 1 |
striated muscle cell | 8.42e-08 | 4 |