FFCP PHASE1:Hg19::chr11:117075376..117075390,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-292bp_to_uc001pqq.1_5end | |association_with_transcript=-292bp_to_uc001pqq.1_5end | ||
|cluster_id=chr11:117075376..117075390,+ | |||
|coexpression_cluster_id=C3086 | |||
|description=CAGE_peak_3_at_uc001pqq.1_5end | |description=CAGE_peak_3_at_uc001pqq.1_5end | ||
|id=chr11:117075376..117075390,+ | |id=chr11:117075376..117075390,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.33e-17!180;CL:0000057!1.38e-11!75;CL:0000359!2.00e-08!32;CL:0000192!1.96e-07!42;CL:0000514!1.96e-07!42;CL:0000393!7.94e-07!60;CL:0000211!7.94e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.33e-17!180;CL:0000057!1.38e-11!75;CL:0000359!2.00e-08!32;CL:0000192!1.96e-07!42;CL:0000514!1.96e-07!42;CL:0000393!7.94e-07!60;CL:0000211!7.94e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.89e-08;32!CL:0000632;1.96e-07;3!CL:0000197;3.23e-07;6!CL:0000098;3.23e-07;6!CL:0002167;3.23e-07;6!CL:0002620;3.55e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-09,76;CL:0000359,1.11e-07,32;CL:0000632,2.56e-07,3;CL:0000197,2.58e-07,6;CL:0000098,2.58e-07,6;CL:0002167,2.58e-07,6;CL:0002620,3.60e-07,23;CL:0000136,4.96e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.14e-08!84;UBERON:0002049!8.04e-08!79;UBERON:0007798!8.04e-08!79;UBERON:0000468!1.17e-07!659;UBERON:0001009!8.27e-07!113;UBERON:0001981!8.62e-07!60;UBERON:0007500!8.62e-07!60;UBERON:0004537!8.62e-07!60;UBERON:0006965!8.62e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.33e-07;6!UBERON:0002358;7.33e-07;6!UBERON:0003684;7.33e-07;6!UBERON:0001178;7.33e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.88e-07,6;UBERON:0002358,5.88e-07,6;UBERON:0003684,5.88e-07,6;UBERON:0001178,5.88e-07,6 | |||
|phase1_expression=0.908391896352783,1.2846031433459,0.986680828671798,4.00293193412522,1.78784437770915,2.61701557230111,2.53299878168311,0,0,0.491467873003018,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,3.65155045193687,0,0.861847406537515,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,3.61439152384566,0.50133791063589,0.579386075843295,0,0,1.70162670895322,0.886917589850256,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,3.03913227994991,0.132409180813219,0.860509862246441,0.709336764396714,2.24271040056923,2.1349799145941,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0,0,1.31693286264251,1.5324389789951,0.150238058906597,0.680593098960126,3.58779271377724,2.34913127700424,2.33125091275518,0,0,2.06112432036503,3.35010341396862,0.675105328965065,0.584622030967192,4.29137416214995,1.84099797284599,0.161646056818812,3.90510551768276,0.503760491138201,2.20428770003634,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,9.83971031364021,4.16029747645464,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,1.79951384127703,0,0,0,5.5113716763064,0,0,1.01346914667305,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.49076596687656,0,0,6.03115498439341,5.88815663030634,2.68094105557689,2.6942525448324,0,2.27407504055985,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,1.99500565274481,1.68396056659844,0.512556597022804,2.55853624533352,3.37793234401576,0,0.308419387605311,0.887808626565635,0.0821271560138091,0,0.116210378459959,0,0,0,1.03333003348146,0.182091168006717,0.393373244878272,0.902399225814824,0,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.534192213880424,0.165284915360978,0,0,0.10115778085555,3.71876439437829,2.20368642781448,0,0.308033580176089,1.59691809095107,0,1.29726953372744,0.858749320451947,0,1.58189712359363,0.953150969619124,0.767693373934002,0,0,1.56989728039846,0,0,0.117812402345686,0.606547444719948,0,0,0,0,2.11300293513511,0.545999645631943,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,1.01455188481352,3.0982349809975,1.12678241012897,0.573645408816206,0.785992328104969,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,6.5751836122853,0.552567831062295,0,0,0,2.17727711363265,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.769502585037971,0.113942055847001,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,6.96683351754953,0.176915129006678,5.49927130440263,0,0,0,0.134802265961354,0,0,0,0,0,2.76209081994573,3.62972148145992,0,0.884612114798832,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.837847203816763,2.7499250881402,0,0,0.429226048136571,0.223171457441873,0.134366944973453,2.52209918479682,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.63293680054705,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0.265841714557995,1.5652351854352,1.35231848097497,1.90402606084398,0.813741466409323,1.63663793282303,0.322231671127465,0.464033759878494,2.3885753321917,0,2.74716564146234,2.35724642136143,0,0,0.214441591374926,0.782982875895635,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,3.87943538059752,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,4.56579360254748,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,3.18692818280077,0,0.392616934229891,0,0,1.35941691750254,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,1.29787968637137,0.504665699340316,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,1.21270313374932,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,4.69281884806909,1.34465588601153,2.44137706989443,0,0.402547587182052,0 | |phase1_expression=0.908391896352783,1.2846031433459,0.986680828671798,4.00293193412522,1.78784437770915,2.61701557230111,2.53299878168311,0,0,0.491467873003018,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,3.65155045193687,0,0.861847406537515,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2786256184353,3.61439152384566,0.50133791063589,0.579386075843295,0,0,1.70162670895322,0.886917589850256,0.790513071238134,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,3.03913227994991,0.132409180813219,0.860509862246441,0.709336764396714,2.24271040056923,2.1349799145941,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0,0,1.31693286264251,1.5324389789951,0.150238058906597,0.680593098960126,3.58779271377724,2.34913127700424,2.33125091275518,0,0,2.06112432036503,3.35010341396862,0.675105328965065,0.584622030967192,4.29137416214995,1.84099797284599,0.161646056818812,3.90510551768276,0.503760491138201,2.20428770003634,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,9.83971031364021,4.16029747645464,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,1.79951384127703,0,0,0,5.5113716763064,0,0,1.01346914667305,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.49076596687656,0,0,6.03115498439341,5.88815663030634,2.68094105557689,2.6942525448324,0,2.27407504055985,0,0.664225598535437,0.368738337083406,0.695068915744663,0,0,0,0,0.106727557803444,0,1.66435439510497,0,0.248107807818777,1.99500565274481,1.68396056659844,0.512556597022804,2.55853624533352,3.37793234401576,0,0.308419387605311,0.887808626565635,0.0821271560138091,0,0.116210378459959,0,0,0,1.03333003348146,0.182091168006717,0.393373244878272,0.902399225814824,0,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.534192213880424,0.165284915360978,0,0,0.10115778085555,3.71876439437829,2.20368642781448,0,0.308033580176089,1.59691809095107,0,1.29726953372744,0.858749320451947,0,1.58189712359363,0.953150969619124,0.767693373934002,0,0,1.56989728039846,0,0,0.117812402345686,0.606547444719948,0,0,0,0,2.11300293513511,0.545999645631943,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,1.01455188481352,3.0982349809975,1.12678241012897,0.573645408816206,0.785992328104969,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0.296964680832639,0,0.994147647766298,0,0,0,0,6.5751836122853,0.552567831062295,0,0,0,2.17727711363265,0,0,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.769502585037971,0.113942055847001,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,6.96683351754953,0.176915129006678,5.49927130440263,0,0,0,0.134802265961354,0,0,0,0,0,2.76209081994573,3.62972148145992,0,0.884612114798832,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0.0801588202515337,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.837847203816763,2.7499250881402,0,0,0.429226048136571,0.223171457441873,0.134366944973453,2.52209918479682,0,0,0,0,0,0,0,0,0,0.412618309791701,0.83088067605837,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.63293680054705,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0.265841714557995,1.5652351854352,1.35231848097497,1.90402606084398,0.813741466409323,1.63663793282303,0.322231671127465,0.464033759878494,2.3885753321917,0,2.74716564146234,2.35724642136143,0,0,0.214441591374926,0.782982875895635,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,3.87943538059752,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0,0,0,0,0,0,0,0.206686796501184,0,0,0,5.45832296228224,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.313972371402056,0,0,4.56579360254748,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,3.18692818280077,0,0.392616934229891,0,0,1.35941691750254,0,0.0644578879735772,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,1.29787968637137,0.504665699340316,0,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,1.21270313374932,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,4.69281884806909,1.34465588601153,2.44137706989443,0,0.402547587182052,0 | ||
|short_description=p3@uc001pqq.1 | |short_description=p3@uc001pqq.1 | ||
}} | }} |
Latest revision as of 18:34, 23 July 2015
Short description: | p3@uc001pqq.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001pqq.1_5end |
Coexpression cluster: | C3086_Mesenchymal_Chondrocyte_Olfactory_Multipotent_aorta_colon_penis |
Association with transcript: | -292bp_to_uc001pqq.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-09 | 76 |
vascular associated smooth muscle cell | 1.11e-07 | 32 |
hepatic stellate cell | 2.56e-07 | 3 |
receptor cell | 2.58e-07 | 6 |
sensory epithelial cell | 2.58e-07 | 6 |
olfactory epithelial cell | 2.58e-07 | 6 |
skin fibroblast | 3.60e-07 | 23 |
fat cell | 4.96e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.88e-07 | 6 |
peritoneum | 5.88e-07 | 6 |
abdominal cavity | 5.88e-07 | 6 |
visceral peritoneum | 5.88e-07 | 6 |