FFCP PHASE1:Hg19::chr11:122022942..122022947,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406892 | |EntrezGene=406892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31487 | |HGNC=31487 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end | |association_with_transcript=68bp_to_NR_029515,uc001pyh.1_5end | ||
|cluster_id=chr11:122022942..122022947,- | |||
|coexpression_cluster_id=C3103 | |||
|description=CAGE_peak_1_at_MIR100_5end | |description=CAGE_peak_1_at_MIR100_5end | ||
|id=chr11:122022942..122022947,- | |id=chr11:122022942..122022947,- | ||
|ontology_enrichment_celltype=CL:0000057!8.25e-23!75;CL:0000055!1.45e-20!180;CL:0002620!2.14e-14!23 | |ontology_enrichment_celltype=CL:0000057!8.25e-23!75;CL:0000055!1.45e-20!180;CL:0002620!2.14e-14!23 | ||
|ontology_enrichment_celltype_v019=CL:1000306;6.96e-21;4!CL:0002547;6.96e-21;4!CL:0000057;5.92e-09;73!CL:0002620;7.15e-08;23!CL:0000135;1.52e-07;3!CL:0000388;1.52e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-24,76;CL:1000306,8.20e-21,4;CL:0002547,8.20e-21,4;CL:0002620,7.73e-08,23;CL:0000135,1.13e-07,3;CL:0000388,1.13e-07,3;CL:0000048,8.70e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.95e-10!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.96e-21;4!UBERON:0000415;6.96e-21;4!UBERON:0007240;6.96e-21;4!UBERON:0005742;6.96e-21;4!UBERON:0005734;6.96e-21;4!UBERON:0004664;6.96e-21;4!UBERON:0004663;6.96e-21;4!UBERON:0000947;2.81e-08;21!UBERON:0010191;2.81e-08;21!UBERON:0007846;1.52e-07;3!UBERON:0000043;1.52e-07;3!UBERON:0007845;1.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,8.20e-21,4;UBERON:0007240,8.20e-21,4;UBERON:0005742,8.20e-21,4;UBERON:0005734,8.20e-21,4;UBERON:0004664,8.20e-21,4;UBERON:0004663,8.20e-21,4;UBERON:0004797,5.90e-12,7;UBERON:0000947,2.75e-08,21;UBERON:0010191,2.75e-08,21;UBERON:0007846,1.13e-07,3;UBERON:0000043,1.13e-07,3;UBERON:0007845,1.13e-07,3;UBERON:0003102,3.97e-07,99 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0.795285947051099,0.973269740605272,0.378139268656271,0.886917589850256,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0,1.01304409331664,2.38336525463794,2.58152958673932,1.41867352879343,0.560677600142307,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.298897361103602,0.587172493218824,0.647491777472526,0.421352420106746,1.42907919878425,1.22834317311768,0.103325781175765,0,0.989067717114227,0,0,1.0100166837244,1.87677779807946,0.831192346452549,0,0.30648779579902,0,0.226864366320042,4.12596162084383,0.85422955527427,0.847727604638247,4.50136644126603,0.103052529238439,2.83404594050192,0.37223371266318,2.19409231913646,0.584622030967192,2.01947019395292,0.644349290496095,0.80823028409406,2.13005755509969,0.201504196455281,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66004457238855,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0,0,0.479249710983165,0,0,0.868687840005475,2.26023954805422,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.35142424497814,0,0,0,0,0.553107505625109,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0.128139149255701,0,2.2519548960105,0,0.616838775210622,0.355123450626254,0,0,0.116210378459959,0,1.20303882181971,0,0.114814448164607,0.728364672026868,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.435050081742686,0.852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,2.20368642781448,0,0.308033580176089,0,0,0,1.28812398067792,0,0.949138274156178,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.706874414074119,0,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.556543525114529,0,0.844501632511974,0.19924798825107,0,0,0.306806047506464,0,1.24415835064723,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0,0,0.959293472527256,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0.621262677827163,0,0,0.418411385249333,0.407992870545287,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,1.72844298240254,0.653174720218818,0,0,1.36310417428337,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.895528817321244,0,1.10961172300523,0.568209015825267,1.50940741051545,0.889811221596536,0,0.453692771289717,0.777186002913902,0.443565449968902,0.955780602982214,0,0.621051827505038,1.24411862352257,1.59505028734797,0,0.150257608997218,0.380805212168795,0,1.09109195521536,0.107410557042488,0.928067519756987,0.398095888698616,2.40016658797892,0,0,0,0,0,0,0,0.926089897295336,0.489473409012935,0.895444205407437,0.308801447160972,0.219284049578707,1.06013487567529,1.54331230616732,1.01365464391844,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0.756215088665154,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.236387681767936,1.11231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0.853818767021724,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0.795285947051099,0.973269740605272,0.378139268656271,0.886917589850256,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0,0,1.01304409331664,2.38336525463794,2.58152958673932,1.41867352879343,0.560677600142307,0,0,0,0.404132016209064,0,0,0,0,0.312160076830321,0,0.298897361103602,0.587172493218824,0.647491777472526,0.421352420106746,1.42907919878425,1.22834317311768,0.103325781175765,0,0.989067717114227,0,0,1.0100166837244,1.87677779807946,0.831192346452549,0,0.30648779579902,0,0.226864366320042,4.12596162084383,0.85422955527427,0.847727604638247,4.50136644126603,0.103052529238439,2.83404594050192,0.37223371266318,2.19409231913646,0.584622030967192,2.01947019395292,0.644349290496095,0.80823028409406,2.13005755509969,0.201504196455281,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66004457238855,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.899756920638513,0,0,0,0.479249710983165,0,0,0.868687840005475,2.26023954805422,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.35142424497814,0,0,0,0,0.553107505625109,0.521301686808497,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0.128139149255701,0,2.2519548960105,0,0.616838775210622,0.355123450626254,0,0,0.116210378459959,0,1.20303882181971,0,0.114814448164607,0.728364672026868,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.435050081742686,0.852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,2.20368642781448,0,0.308033580176089,0,0,0,1.28812398067792,0,0.949138274156178,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.706874414074119,0,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.556543525114529,0,0.844501632511974,0.19924798825107,0,0,0.306806047506464,0,1.24415835064723,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0,0,0,0,0.959293472527256,0,0.0633107959558787,0.586654148204409,0,0,0,0,0,0,0.14405479798815,0.621262677827163,0,0,0.418411385249333,0.407992870545287,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,1.72844298240254,0.653174720218818,0,0,1.36310417428337,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.895528817321244,0,1.10961172300523,0.568209015825267,1.50940741051545,0.889811221596536,0,0.453692771289717,0.777186002913902,0.443565449968902,0.955780602982214,0,0.621051827505038,1.24411862352257,1.59505028734797,0,0.150257608997218,0.380805212168795,0,1.09109195521536,0.107410557042488,0.928067519756987,0.398095888698616,2.40016658797892,0,0,0,0,0,0,0,0.926089897295336,0.489473409012935,0.895444205407437,0.308801447160972,0.219284049578707,1.06013487567529,1.54331230616732,1.01365464391844,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0.756215088665154,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.236387681767936,1.11231401892069,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0.340853619036631,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.849635573439084,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0,0.853818767021724,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p1@MIR100 | |short_description=p1@MIR100 | ||
}} | }} |
Latest revision as of 07:44, 16 September 2015
Short description: | p1@MIR100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR100_5end |
Coexpression cluster: | C3103_Fibroblast_prostate_Olfactory_Smooth_meningioma_Preadipocyte_Myoblast |
Association with transcript: | 68bp_to_NR_029515, uc001pyh.1_5end |
EntrezGene: | MIR100 |
HGNC: | 31487 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-24 | 76 |
fibroblast of tunica adventitia of artery | 8.20e-21 | 4 |
fibroblast of the aortic adventitia | 8.20e-21 | 4 |
skin fibroblast | 7.73e-08 | 23 |
fibrocyte | 1.13e-07 | 3 |
tendon cell | 1.13e-07 | 3 |
multi fate stem cell | 8.70e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
artery wall | 8.20e-21 | 4 |
tunica adventitia of artery | 8.20e-21 | 4 |
adventitia | 8.20e-21 | 4 |
tunica adventitia of blood vessel | 8.20e-21 | 4 |
aorta tunica adventitia | 8.20e-21 | 4 |
aorta wall | 8.20e-21 | 4 |
blood vessel layer | 5.90e-12 | 7 |
aorta | 2.75e-08 | 21 |
aortic system | 2.75e-08 | 21 |
dense regular connective tissue | 1.13e-07 | 3 |
tendon | 1.13e-07 | 3 |
regular connective tissue | 1.13e-07 | 3 |
surface structure | 3.97e-07 | 99 |