FFCP PHASE1:Hg19::chr11:133815282..133815297,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:133815282..133815297,- | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_at_chr11:133815282..133815297,- | |description=CAGE_peak_at_chr11:133815282..133815297,- | ||
|id=chr11:133815282..133815297,- | |id=chr11:133815282..133815297,- | ||
|ontology_enrichment_celltype=CL:0000084!3.79e-24!25;CL:0000827!3.79e-24!25;CL:0000791!8.95e-20!18;CL:0000789!8.95e-20!18;CL:0002420!8.95e-20!18;CL:0002419!8.95e-20!18;CL:0000790!8.95e-20!18;CL:0000625!3.35e-15!11;CL:0000838!7.45e-11!52;CL:0000542!1.44e-10!53;CL:0000051!1.44e-10!53;CL:0000624!1.42e-07!6 | |ontology_enrichment_celltype=CL:0000084!3.79e-24!25;CL:0000827!3.79e-24!25;CL:0000791!8.95e-20!18;CL:0000789!8.95e-20!18;CL:0002420!8.95e-20!18;CL:0002419!8.95e-20!18;CL:0000790!8.95e-20!18;CL:0000625!3.35e-15!11;CL:0000838!7.45e-11!52;CL:0000542!1.44e-10!53;CL:0000051!1.44e-10!53;CL:0000624!1.42e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000895;5.37e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,6.06e-13,1;CL:0000895,6.06e-13,1;CL:0002436,6.06e-13,1;CL:0002427,6.06e-13,1;CL:0002428,6.06e-13,1;CL:0002429,6.06e-13,1;CL:0002433,6.06e-13,1;CL:0002431,6.06e-13,1;CL:0002432,6.06e-13,1;CL:0000893,4.17e-07,2;CL:0002489,4.17e-07,2;CL:0000809,4.17e-07,2;CL:0000808,4.17e-07,2;CL:0000894,4.17e-07,2;CL:0000806,4.17e-07,2;CL:0000807,4.17e-07,2;CL:0000805,4.17e-07,2;CL:0002425,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;5.37e-13;1!UBERON:0001045;5.37e-13;1!CL:0002425;3.92e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;5.37e-13;1!UBERON:0001153;5.37e-13;1!UBERON:0009854;5.37e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.82e-13,1;UBERON:0001153,6.82e-13,1;UBERON:0001045,6.82e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,1.67186495390678,0,0.473447805734733,0,2.67385096524417,0.294605907474837,1.32920336750173,1.62482318259009,1.66518715643378,1.04047478047903,1.97325485524411,3.31620021343018,2.02862160014537,0.14828656316206,1.07016331235885,0,2.83273356743915,1.14966148080576,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.752875595388864,0.895906278080929,1.24930726552346,0.710331756132051,0,0.403213486449465,1.06976078313403,0.579297615531196,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,1.69338866179106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.988823245360557,0,0.19924798825107,1.10513566212459,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,1.67186495390678,0,0.473447805734733,0,2.67385096524417,0.294605907474837,1.32920336750173,1.62482318259009,1.66518715643378,1.04047478047903,1.97325485524411,3.31620021343018,2.02862160014537,0.14828656316206,1.07016331235885,0,2.83273356743915,1.14966148080576,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.752875595388864,0.895906278080929,1.24930726552346,0.710331756132051,0,0.403213486449465,1.06976078313403,0.579297615531196,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,1.69338866179106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0.988823245360557,0,0.19924798825107,1.10513566212459,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr11:133815282..133815297,- | |short_description=p@chr11:133815282..133815297,- | ||
}} | }} |
Latest revision as of 20:09, 23 July 2015
Short description: | p@chr11:133815282..133815297, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:133815282..133815297, - |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 6.06e-13 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 6.06e-13 | 1 |
mature CD4 single-positive thymocyte | 6.06e-13 | 1 |
resting double-positive thymocyte | 6.06e-13 | 1 |
double-positive blast | 6.06e-13 | 1 |
CD69-positive double-positive thymocyte | 6.06e-13 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 6.06e-13 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 6.06e-13 | 1 |
CD24-positive, CD4 single-positive thymocyte | 6.06e-13 | 1 |
thymocyte | 4.17e-07 | 2 |
double negative thymocyte | 4.17e-07 | 2 |
double-positive, alpha-beta thymocyte | 4.17e-07 | 2 |
DN4 thymocyte | 4.17e-07 | 2 |
DN1 thymic pro-T cell | 4.17e-07 | 2 |
DN2 thymocyte | 4.17e-07 | 2 |
DN3 thymocyte | 4.17e-07 | 2 |
immature single positive thymocyte | 4.17e-07 | 2 |
early T lineage precursor | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.82e-13 | 1 |
caecum | 6.82e-13 | 1 |
midgut | 6.82e-13 | 1 |