FFCP PHASE1:Hg19::chr10:135139802..135139811,-: Difference between revisions
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|id=chr10:135139802..135139811,-
|short_description=p9@CALY
|description=CAGE_peak_9_at_CALY_5end
|association_with_transcript=6bp_to_ENST00000467611_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50632 | |EntrezGene=50632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17938 | |HGNC=17938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000467611_5end | |||
|cluster_id=chr10:135139802..135139811,- | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_9_at_CALY_5end | |||
|id=chr10:135139802..135139811,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.86e-53;5!CL:0002321;1.13e-18;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |||
|ontology_enrichment_disease=DOID:171!8.78e-24!10;DOID:3095!3.66e-18!22;DOID:2994!3.66e-18!22;DOID:169!6.59e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:169;1.22e-44;6!DOID:171;2.38e-27;10!DOID:3095;4.01e-13;22!DOID:2994;4.01e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.76e-45,6;DOID:171,2.08e-27,10;DOID:3095,3.77e-13,22;DOID:2994,3.77e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.42e-13!5;UBERON:0002410!5.42e-13!5;UBERON:0001882!1.64e-07!1;UBERON:0005403!1.64e-07!1;UBERON:0002022!1.87e-07!1;UBERON:0000010!2.05e-07!8;UBERON:0000073!2.26e-07!94;UBERON:0001016!2.26e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.86e-53;5!UBERON:0002410;2.86e-53;5!UBERON:0000010;3.09e-30;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.19e-53,5;UBERON:0002410,2.19e-53,5;UBERON:0000010,2.66e-30,8 | |||
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|short_description=p9@CALY | |||
}} | }} |
Latest revision as of 05:37, 17 September 2015
Short description: | p9@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CALY_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 6bp_to_ENST00000467611_5end |
EntrezGene: | CALY |
HGNC: | 17938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.19e-53 | 5 |
autonomic nervous system | 2.19e-53 | 5 |
peripheral nervous system | 2.66e-30 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.76e-45 | 6 |
neuroectodermal tumor | 2.08e-27 | 10 |
germ cell and embryonal cancer | 3.77e-13 | 22 |
germ cell cancer | 3.77e-13 | 22 |