FFCP PHASE1:Hg19::chr16:81819390..81819400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5336 | |EntrezGene=5336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9066 | |HGNC=9066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_uc010chg.1_5end | |association_with_transcript=39bp_to_uc010chg.1_5end | ||
|cluster_id=chr16:81819390..81819400,+ | |||
|description=CAGE_peak_5_at_PLCG2_5end | |description=CAGE_peak_5_at_PLCG2_5end | ||
|id=chr16:81819390..81819400,+ | |id=chr16:81819390..81819400,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.41e-40!24;CL:0000826!3.41e-40!24;CL:0000838!6.53e-17!52;CL:0000542!1.55e-16!53;CL:0000051!1.55e-16!53;CL:0000785!1.67e-11!2;CL:0000955!1.67e-11!2;CL:0000818!1.67e-11!2;CL:0000954!1.67e-11!2;CL:0000816!1.67e-11!2;CL:0000236!3.30e-09!14;CL:0000817!6.00e-08!3 | |ontology_enrichment_celltype=CL:0000945!3.41e-40!24;CL:0000826!3.41e-40!24;CL:0000838!6.53e-17!52;CL:0000542!1.55e-16!53;CL:0000051!1.55e-16!53;CL:0000785!1.67e-11!2;CL:0000955!1.67e-11!2;CL:0000818!1.67e-11!2;CL:0000954!1.67e-11!2;CL:0000816!1.67e-11!2;CL:0000236!3.30e-09!14;CL:0000817!6.00e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.74e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.75e-17,24;CL:0000826,1.75e-17,24;CL:0000838,4.31e-08,52;CL:0000542,6.14e-08,53;CL:0000051,6.14e-08,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.33e-17;1 | |||
|ontology_enrichment_disease=DOID:0060058!8.28e-13!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.15e-10!35;UBERON:0001155!6.23e-10!9;UBERON:0000160!1.49e-08!27;UBERON:0000059!3.92e-08!11;UBERON:0004921!9.51e-08!129;UBERON:0004185!9.51e-08!129;UBERON:0002106!1.37e-07!3;UBERON:0004854!1.37e-07!3;UBERON:0009034!1.37e-07!3;UBERON:0002095!1.37e-07!3;UBERON:0004782!1.37e-07!3;UBERON:0003281!1.37e-07!3;UBERON:0009664!1.37e-07!3;UBERON:0002296!1.37e-07!3;UBERON:0005602!1.37e-07!3;UBERON:0001179!1.37e-07!3;UBERON:0006293!1.37e-07!3;UBERON:0004177!7.01e-07!7;UBERON:0007023!7.63e-07!115;UBERON:0001007!9.07e-07!155;UBERON:0001555!9.07e-07!155;UBERON:0007026!9.07e-07!155;UBERON:0001154!9.15e-07!1;UBERON:0001153!9.15e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;1.49e-29;9!UBERON:0000059;2.86e-24;11!UBERON:0000160;7.32e-23;17!UBERON:0005409;6.29e-18;22!UBERON:0001154;1.33e-17;1!UBERON:0001153;1.33e-17;1!UBERON:0009854;1.33e-17;1!UBERON:0004921;6.69e-12;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.54e-29,9;UBERON:0000059,2.95e-24,11;UBERON:0000160,6.99e-23,17;UBERON:0001154,1.22e-17,1;UBERON:0001153,1.22e-17,1;UBERON:0001045,1.22e-17,1;UBERON:0005409,6.89e-16,25 | |||
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|short_description=p5@PLCG2 | |short_description=p5@PLCG2 | ||
}} | }} |
Latest revision as of 01:45, 18 September 2015
Short description: | p5@PLCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLCG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_uc010chg.1_5end |
EntrezGene: | PLCG2 |
HGNC: | 9066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.75e-17 | 24 |
pro-B cell | 1.75e-17 | 24 |
lymphoid lineage restricted progenitor cell | 4.31e-08 | 52 |
lymphocyte | 6.14e-08 | 53 |
common lymphoid progenitor | 6.14e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
colon | 1.54e-29 | 9 |
large intestine | 2.95e-24 | 11 |
intestine | 6.99e-23 | 17 |
vermiform appendix | 1.22e-17 | 1 |
caecum | 1.22e-17 | 1 |
midgut | 1.22e-17 | 1 |
gastrointestinal system | 6.89e-16 | 25 |