FFCP PHASE1:Hg19::chr17:48261721..48261729,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48261721..48261729,- | |||
|coexpression_cluster_id=C292 | |||
|description=CAGE_peak_at_chr17:48261721..48261729,- | |description=CAGE_peak_at_chr17:48261721..48261729,- | ||
|id=chr17:48261721..48261729,- | |id=chr17:48261721..48261729,- | ||
|ontology_enrichment_celltype=CL:0000055!3.71e-26!180;CL:0000057!2.08e-17!75;CL:0000183!1.12e-10!59;CL:0002334!2.27e-10!12;CL:0000680!3.89e-10!57;CL:0000056!3.89e-10!57;CL:0000355!3.89e-10!57;CL:0000187!6.62e-10!54;CL:0000048!1.02e-09!430;CL:0000723!4.42e-09!436;CL:0000034!7.78e-09!444;CL:0000393!1.67e-08!60;CL:0000211!1.67e-08!60;CL:0002620!2.27e-07!23;CL:0000499!3.09e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.71e-26!180;CL:0000057!2.08e-17!75;CL:0000183!1.12e-10!59;CL:0002334!2.27e-10!12;CL:0000680!3.89e-10!57;CL:0000056!3.89e-10!57;CL:0000355!3.89e-10!57;CL:0000187!6.62e-10!54;CL:0000048!1.02e-09!430;CL:0000723!4.42e-09!436;CL:0000034!7.78e-09!444;CL:0000393!1.67e-08!60;CL:0000211!1.67e-08!60;CL:0002620!2.27e-07!23;CL:0000499!3.09e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.39e-09;12!CL:0000138;1.27e-07;6!CL:0000135;3.96e-07;3!CL:0000388;3.96e-07;3!CL:0002579;4.50e-07;3!CL:0000499;4.63e-07;28!CL:0000153;9.26e-07;9!CL:0000447;9.26e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.57e-14,76;CL:0002334,3.26e-09,12;CL:0000136,5.22e-09,15;CL:0000058,9.20e-08,6;CL:0000138,9.20e-08,6;CL:0000135,3.32e-07,3;CL:0000388,3.32e-07,3;CL:0000499,4.25e-07,28;CL:0002579,5.37e-07,3;CL:0000048,9.12e-07,427;CL:0000153,9.21e-07,9;CL:0000447,9.21e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.01e-10!61;UBERON:0002036!1.01e-10!61;UBERON:0003082!1.01e-10!61;UBERON:0002385!5.01e-10!63;UBERON:0001015!5.01e-10!63;UBERON:0000383!5.01e-10!63;UBERON:0004290!2.78e-09!70;UBERON:0000914!1.64e-08!83;UBERON:0002329!1.64e-08!83;UBERON:0003077!1.64e-08!83;UBERON:0003059!1.64e-08!83;UBERON:0007282!1.64e-08!83;UBERON:0009618!1.64e-08!83;UBERON:0007285!1.64e-08!83;UBERON:0000486!1.70e-07!82;UBERON:0003688!2.80e-07!6;UBERON:0002358!2.80e-07!6;UBERON:0003684!2.80e-07!6;UBERON:0001178!2.80e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.78e-12;6!UBERON:0002358;3.78e-12;6!UBERON:0003684;3.78e-12;6!UBERON:0001178;3.78e-12;6!UBERON:0004457;3.82e-10;9!UBERON:0000042;3.82e-10;9!UBERON:0001013;2.69e-07;14!UBERON:0003104;3.19e-07;7!UBERON:0009142;3.19e-07;7!UBERON:0007846;3.96e-07;3!UBERON:0000043;3.96e-07;3!UBERON:0007845;3.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.41e-12,6;UBERON:0002358,5.41e-12,6;UBERON:0003684,5.41e-12,6;UBERON:0001178,5.41e-12,6;UBERON:0001013,2.51e-07,14;UBERON:0007846,3.32e-07,3;UBERON:0000043,3.32e-07,3;UBERON:0007845,3.32e-07,3;UBERON:0004457,4.13e-07,12;UBERON:0000042,4.13e-07,12;UBERON:0002384,4.85e-07,371 | |||
|phase1_expression=3.99692434395225,1.2846031433459,3.80576891059122,2.00146596706261,4.02264984984559,3.48935409640147,5.06599756336621,0,0.261185628199839,0,0,0,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0,0,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,0,0.255725123687061,5.06014813338393,2.50668955317945,1.44846518960824,2.3858578411533,1.94653948121054,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0.506522046658319,0.132409180813219,10.6129549677061,0,0,2.1349799145941,4.68668341992604,0,0.134710672069688,0.163461903113459,1.51357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,2.37600571456411,3.95627086845691,0.910161361938026,4.31170885089743,0,0,0,0,0.919463387397059,0.901428353439581,0.226864366320042,3.22901344239952,1.92201649936711,1.90738711043606,1.80054657650641,0.206105058476878,2.57640540045629,1.11670113798954,0.843881661206331,0.389748020644795,1.51460264546469,1.56484827691909,0.161646056818812,2.13005755509969,0.403008392910561,1.01736355386293,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,1.68053230485111,0,1.690605505112,0.797814349754612,2.08014873822732,0,1.41849132023278,0.266422179016099,1.14382394926518,8.13932408087165,0.823240336780769,0.325736184293735,0.710783897485092,0,0.301439377059586,0.871533458600294,0,0,0,0,3.35474797688216,5.7430967917057,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03115498439341,5.70972764150918,2.83864347061082,1.7571212248907,2.10662269809403,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0.783204629850962,4.46086450954113,0,0,0,0,1.66435439510497,2.41912234663744,4.46594054073798,0.767309866440312,5.89386198309454,6.02254001501795,2.04682899626681,7.88184213603677,1.48418066444991,0.308419387605311,2.30830242907065,0.410635780069046,0.519254429183621,1.16210378459959,0,0,0,0.574072240823034,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0.307007349452259,0.551346289938122,0.322260734604821,0.580066775656914,0.255679882248303,3.65031346151623,0,0,0,0,0.929691098594572,6.92587163027408,0,0,0.532306030317022,0,0.55597265731176,0,0.372158369359667,0.632758849437452,1.5250415513906,1.02359116524534,0.42793898803392,0,0,0.899362287916574,0.54907405947211,0.471249609382746,0.606547444719948,1.58510321173008,0,1.46290121726877,0,1.05650146756755,0.682499557039929,3.25232493493539,0,0.551365343546124,0,1.31535265576129,1.15755106853338,1.9676842561399,0.405820753925408,0,0.281695602532241,0.143411352204052,0.982490410131212,0,0,1.05553817648832,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,24.8799070662625,0,0,0,0,0,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0.403100834920358,1.80149941771202,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0.326587360109409,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,2.33713309847224,0,0,0,0.889811221596536,0.228840068396924,1.20984739010591,1.70980920641059,0,0.477890301491107,0,0.776314784381297,0,0,1.5652351854352,3.60618261593324,1.90402606084398,0.406870733204662,0.363697318405119,0.537052785212442,0,1.59238355479446,0.800055529326307,3.77735275701072,2.02049693259551,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,5.99549104274163,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,4.95796724107317,0,0.994581110581374,0.0752103283492573,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,10.0447459256045,0,0,0,0,0,0,0.801711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|phase1_expression=3.99692434395225,1.2846031433459,3.80576891059122,2.00146596706261,4.02264984984559,3.48935409640147,5.06599756336621,0,0.261185628199839,0,0,0,0.791300934685361,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0,0,0.251085279189606,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,0,0.255725123687061,5.06014813338393,2.50668955317945,1.44846518960824,2.3858578411533,1.94653948121054,0.189069634328136,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,0.506522046658319,0.132409180813219,10.6129549677061,0,0,2.1349799145941,4.68668341992604,0,0.134710672069688,0.163461903113459,1.51357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,2.37600571456411,3.95627086845691,0.910161361938026,4.31170885089743,0,0,0,0,0.919463387397059,0.901428353439581,0.226864366320042,3.22901344239952,1.92201649936711,1.90738711043606,1.80054657650641,0.206105058476878,2.57640540045629,1.11670113798954,0.843881661206331,0.389748020644795,1.51460264546469,1.56484827691909,0.161646056818812,2.13005755509969,0.403008392910561,1.01736355386293,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0.87192013766656,0.07333828582095,1.68053230485111,0,1.690605505112,0.797814349754612,2.08014873822732,0,1.41849132023278,0.266422179016099,1.14382394926518,8.13932408087165,0.823240336780769,0.325736184293735,0.710783897485092,0,0.301439377059586,0.871533458600294,0,0,0,0,3.35474797688216,5.7430967917057,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03115498439341,5.70972764150918,2.83864347061082,1.7571212248907,2.10662269809403,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0.783204629850962,4.46086450954113,0,0,0,0,1.66435439510497,2.41912234663744,4.46594054073798,0.767309866440312,5.89386198309454,6.02254001501795,2.04682899626681,7.88184213603677,1.48418066444991,0.308419387605311,2.30830242907065,0.410635780069046,0.519254429183621,1.16210378459959,0,0,0,0.574072240823034,0.546273504020151,1.18011973463482,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0.307007349452259,0.551346289938122,0.322260734604821,0.580066775656914,0.255679882248303,3.65031346151623,0,0,0,0,0.929691098594572,6.92587163027408,0,0,0.532306030317022,0,0.55597265731176,0,0.372158369359667,0.632758849437452,1.5250415513906,1.02359116524534,0.42793898803392,0,0,0.899362287916574,0.54907405947211,0.471249609382746,0.606547444719948,1.58510321173008,0,1.46290121726877,0,1.05650146756755,0.682499557039929,3.25232493493539,0,0.551365343546124,0,1.31535265576129,1.15755106853338,1.9676842561399,0.405820753925408,0,0.281695602532241,0.143411352204052,0.982490410131212,0,0,1.05553817648832,0.658589785919804,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.538651809526579,0.113942055847001,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0,24.8799070662625,0,0,0,0,0,4.83962864194656,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0.403100834920358,1.80149941771202,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0.326587360109409,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,2.33713309847224,0,0,0,0.889811221596536,0.228840068396924,1.20984739010591,1.70980920641059,0,0.477890301491107,0,0.776314784381297,0,0,1.5652351854352,3.60618261593324,1.90402606084398,0.406870733204662,0.363697318405119,0.537052785212442,0,1.59238355479446,0.800055529326307,3.77735275701072,2.02049693259551,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,3.4980478571876,0,0,5.99549104274163,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,4.95796724107317,0,0.994581110581374,0.0752103283492573,1.21023041222112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,10.0447459256045,0,0,0,0,0,0,0.801711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| ||
|short_description=p@chr17:48261721..48261729,- | |short_description=p@chr17:48261721..48261729,- | ||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p@chr17:48261721..48261729, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261721..48261729, - |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.57e-14 | 76 |
preadipocyte | 3.26e-09 | 12 |
fat cell | 5.22e-09 | 15 |
chondroblast | 9.20e-08 | 6 |
chondrocyte | 9.20e-08 | 6 |
fibrocyte | 3.32e-07 | 3 |
tendon cell | 3.32e-07 | 3 |
stromal cell | 4.25e-07 | 28 |
omentum preadipocyte | 5.37e-07 | 3 |
multi fate stem cell | 9.12e-07 | 427 |
GAG secreting cell | 9.21e-07 | 9 |
carbohydrate secreting cell | 9.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.41e-12 | 6 |
peritoneum | 5.41e-12 | 6 |
abdominal cavity | 5.41e-12 | 6 |
visceral peritoneum | 5.41e-12 | 6 |
adipose tissue | 2.51e-07 | 14 |
dense regular connective tissue | 3.32e-07 | 3 |
tendon | 3.32e-07 | 3 |
regular connective tissue | 3.32e-07 | 3 |
cavity lining | 4.13e-07 | 12 |
serous membrane | 4.13e-07 | 12 |
connective tissue | 4.85e-07 | 371 |