FFCP PHASE1:Hg19::chr12:7169889..7169902,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=716 | |EntrezGene=716 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1247 | |HGNC=1247 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7T4 | |UniProt=F5H7T4 | ||
|association_with_transcript=2bp_to_ENST00000542978_5end | |association_with_transcript=2bp_to_ENST00000542978_5end | ||
|cluster_id=chr12:7169889..7169902,+ | |||
|coexpression_cluster_id=C424 | |||
|description=CAGE_peak_6_at_C1S_5end | |description=CAGE_peak_6_at_C1S_5end | ||
|id=chr12:7169889..7169902,+ | |id=chr12:7169889..7169902,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.60e-10!180;CL:0000057!1.66e-09!75 | |ontology_enrichment_celltype=CL:0000055!5.60e-10!180;CL:0000057!1.66e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.88e-11;13!CL:0000135;6.90e-09;3!CL:0000388;6.90e-09;3!CL:0002615;4.46e-08;3!CL:0002622;7.90e-08;3!CL:0000499;2.28e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.51e-12,15;CL:0000135,6.12e-09,3;CL:0000388,6.12e-09,3;CL:0002615,4.73e-08,3;CL:0002622,1.13e-07,3;CL:0000499,2.43e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.35e-08!14 | |ontology_enrichment_disease=DOID:2394!4.35e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-08!115;UBERON:0004457!9.34e-07!12;UBERON:0000042!9.34e-07!12 | |ontology_enrichment_uberon=UBERON:0007023!3.61e-08!115;UBERON:0004457!9.34e-07!12;UBERON:0000042!9.34e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.26e-13;9!UBERON:0000042;6.26e-13;9!UBERON:0003688;6.63e-10;6!UBERON:0002358;6.63e-10;6!UBERON:0003684;6.63e-10;6!UBERON:0001178;6.63e-10;6!UBERON:0007846;6.90e-09;3!UBERON:0000043;6.90e-09;3!UBERON:0007845;6.90e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.27e-09,6;UBERON:0002358,1.27e-09,6;UBERON:0003684,1.27e-09,6;UBERON:0001178,1.27e-09,6;UBERON:0004457,3.27e-09,12;UBERON:0000042,3.27e-09,12;UBERON:0007846,6.12e-09,3;UBERON:0000043,6.12e-09,3;UBERON:0007845,6.12e-09,3 | |||
|phase1_expression=1.09007027562334,3.21150785836475,1.9733616573436,1.0007329835313,6.25745532198203,2.61701557230111,0,1.26343974685366,3.3954131665979,0,0,0,0,0.618831764800233,0.662794751455832,3.36162573225888,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,2.31754430337318,0,3.89307896242109,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.662045904066094,5.44989579422746,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,5.19260551484969,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,2.85452311922534,0.226864366320042,0,0.85422955527427,1.05965950579781,0.300091096084402,0.721367704669072,0,0.37223371266318,0.168776332241266,0.68205903612839,0.504867548488229,1.10459878370759,2.10139873864455,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,2.78620756819187,0,0,0,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,7.60530208930985,9.82827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,2.71295439353627,0.871533458600294,1.29964888536674,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,2.07970861530807,1.42743191037729,1.10391690523754,1.40569697991256,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.781952530212746,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,2.24528075546459,0.768834895534206,1.02341449813341,1.12597744800525,0,0.462629081407967,0.532685175939381,0,2.07701771673448,0.232420756919918,0,0,0,1.14814448164607,1.0925470080403,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.06082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0.751941714077915,1.16013355131383,0,0.445160178233687,0,0,0,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.762520775695299,0,0,0,1.56989728039846,0,1.09814811894422,0.589062011728432,0,0,0.421258456238981,0,6.58026422004468,2.11300293513511,0.136499911407986,3.25232493493539,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,5.2776908824416,6.58589785919804,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.986434056369336,0,0,2.90799823828566,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.21787692703798,0,0.615602068030377,0.91153644677601,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0,0,0.0801588202515337,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,1.39641200636127,0.229160424011684,0.717873024576814,0.399358000997982,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0.537862017998534,0,0.714695326373367,1.32418394073086,0,0,0.864221491201268,0,0,0,0.170388021785422,0,5.56898487976713,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.705797459094515,0,0,0.298509605773748,1.16856654923612,0.554805861502613,0.378806010550178,0.754703705257725,7.11848977277229,2.05956061557231,1.05861646634267,0.466311601748341,1.47855149989634,0.318593534327405,1.79921244865442,0.621051827505038,1.65882483136342,0.797525143673985,1.04349012362347,2.40412174395549,2.66563648518157,0,0.181848659202559,0.322231671127465,0.464033759878494,1.19428766609585,0,1.71697852591396,0.673498977531838,0,0,0.428883182749851,0,0.906823702049089,0,0.489473409012935,0,0.926404341482917,1.53498834705095,0.353378291891762,0,0.844712203265363,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,2.21195617878347,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,7.96238241118321,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,1.71488009437418,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0.215927591218621,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,1.22574160876953,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.375935671919414,0.257831551894309,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,2.645134202577,5.95192029066802,3.69740502905135,2.59575937274273,0.126166424835079,0,0,0,0,0,0,0.985123076837112,0,0,0,1.70587185520785,0.714193294391221,0,0.248298857183432,0,0.25458863311266,0,1.74173398317569,0.342233301085281,0.336760265072938,0.286888821570705,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,1.20764276154616,0 | |phase1_expression=1.09007027562334,3.21150785836475,1.9733616573436,1.0007329835313,6.25745532198203,2.61701557230111,0,1.26343974685366,3.3954131665979,0,0,0,0,0.618831764800233,0.662794751455832,3.36162573225888,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,2.31754430337318,0,3.89307896242109,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.662045904066094,5.44989579422746,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0.490385709340376,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0,1.18800285728205,5.19260551484969,0,0.718618141816238,0,0,0,0.438977620880838,0.30648779579902,2.85452311922534,0.226864366320042,0,0.85422955527427,1.05965950579781,0.300091096084402,0.721367704669072,0,0.37223371266318,0.168776332241266,0.68205903612839,0.504867548488229,1.10459878370759,2.10139873864455,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,2.78620756819187,0,0,0,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,7.60530208930985,9.82827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,2.71295439353627,0.871533458600294,1.29964888536674,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0,0,2.07970861530807,1.42743191037729,1.10391690523754,1.40569697991256,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.781952530212746,0,0,0,0,0,0,0,0,0.496215615637554,0.767309866440312,2.24528075546459,0.768834895534206,1.02341449813341,1.12597744800525,0,0.462629081407967,0.532685175939381,0,2.07701771673448,0.232420756919918,0,0,0,1.14814448164607,1.0925470080403,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.06082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0.751941714077915,1.16013355131383,0,0.445160178233687,0,0,0,0.10115778085555,0,0.94443704049192,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0.762520775695299,0,0,0,1.56989728039846,0,1.09814811894422,0.589062011728432,0,0,0.421258456238981,0,6.58026422004468,2.11300293513511,0.136499911407986,3.25232493493539,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,5.2776908824416,6.58589785919804,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.986434056369336,0,0,2.90799823828566,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0.21787692703798,0,0.615602068030377,0.91153644677601,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0.789168805698781,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.678923115418936,0,1.12990370390266,0,0,0,0,0.0801588202515337,1.06726497369676,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,1.39641200636127,0.229160424011684,0.717873024576814,0.399358000997982,0.429226048136571,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0.537862017998534,0,0.714695326373367,1.32418394073086,0,0,0.864221491201268,0,0,0,0.170388021785422,0,5.56898487976713,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.705797459094515,0,0,0.298509605773748,1.16856654923612,0.554805861502613,0.378806010550178,0.754703705257725,7.11848977277229,2.05956061557231,1.05861646634267,0.466311601748341,1.47855149989634,0.318593534327405,1.79921244865442,0.621051827505038,1.65882483136342,0.797525143673985,1.04349012362347,2.40412174395549,2.66563648518157,0,0.181848659202559,0.322231671127465,0.464033759878494,1.19428766609585,0,1.71697852591396,0.673498977531838,0,0,0.428883182749851,0,0.906823702049089,0,0.489473409012935,0,0.926404341482917,1.53498834705095,0.353378291891762,0,0.844712203265363,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,2.21195617878347,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,7.96238241118321,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,1.12815492523886,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,1.71488009437418,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0.215927591218621,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,1.29485767437579,0.307988420568741,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,1.22574160876953,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.375935671919414,0.257831551894309,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,2.645134202577,5.95192029066802,3.69740502905135,2.59575937274273,0.126166424835079,0,0,0,0,0,0,0.985123076837112,0,0,0,1.70587185520785,0.714193294391221,0,0.248298857183432,0,0.25458863311266,0,1.74173398317569,0.342233301085281,0.336760265072938,0.286888821570705,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,1.20764276154616,0 | ||
|short_description=p6@C1S | |short_description=p6@C1S | ||
}} | }} |
Latest revision as of 16:49, 24 September 2015
Short description: | p6@C1S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C1S_5end |
Coexpression cluster: | C424_Hepatocyte_liver_Synoviocyte_tenocyte_Fibroblast_Adipocyte_Cardiac |
Association with transcript: | 2bp_to_ENST00000542978_5end |
EntrezGene: | C1S |
HGNC: | 1247 |
UniProt: | F5H7T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.51e-12 | 15 |
fibrocyte | 6.12e-09 | 3 |
tendon cell | 6.12e-09 | 3 |
adipocyte of omentum tissue | 4.73e-08 | 3 |
prostate stromal cell | 1.13e-07 | 3 |
stromal cell | 2.43e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.27e-09 | 6 |
peritoneum | 1.27e-09 | 6 |
abdominal cavity | 1.27e-09 | 6 |
visceral peritoneum | 1.27e-09 | 6 |
cavity lining | 3.27e-09 | 12 |
serous membrane | 3.27e-09 | 12 |
dense regular connective tissue | 6.12e-09 | 3 |
tendon | 6.12e-09 | 3 |
regular connective tissue | 6.12e-09 | 3 |