FFCP PHASE1:Hg19::chr11:117695233..117695244,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:117695233..117695244,-
|short_description=p11@FXYD2
|description=CAGE_peak_11_at_FXYD2_5end
|association_with_transcript=214bp_to_ENST00000534383_5end
|E...") |
No edit summary |
||
(12 intermediate revisions by 2 users not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=486 | |EntrezGene=486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4026 | |HGNC=4026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000534383_5end | |||
|cluster_id=chr11:117695233..117695244,- | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_11_at_FXYD2_5end | |||
|id=chr11:117695233..117695244,- | |||
|ontology_enrichment_celltype=CL:1000507!2.06e-24!12;CL:1000494!2.06e-24!12;CL:1000497!7.64e-21!18;CL:0002518!7.64e-21!18;CL:0000239!1.02e-19!3;CL:1000615!1.02e-19!3;CL:0002306!1.02e-19!3;CL:1000449!4.20e-18!16;CL:0002681!8.94e-12!13;CL:0002584!8.94e-12!13 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.23e-27;3!CL:1000615;2.23e-27;3!CL:0002306;2.23e-27;3!CL:1000507;6.41e-09;10!CL:1000494;6.41e-09;10!CL:0002681;1.40e-07;12!CL:0002584;1.40e-07;12!CL:0000182;1.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.38e-27,3;CL:1000615,2.38e-27,3;CL:0002306,2.38e-27,3;CL:1000507,6.54e-09,10;CL:1000494,6.54e-09,10;CL:0002681,1.42e-07,12;CL:0002584,1.42e-07,12;CL:0000182,1.73e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.71e-21;1!UBERON:0004161;9.54e-17;11!UBERON:0009497;2.79e-14;13 | |||
|ontology_enrichment_disease=DOID:4468!1.94e-13!2;DOID:0060060!1.25e-07!1;DOID:0060061!1.25e-07!1;DOID:8691!1.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.23e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.06e-24!12;UBERON:0001231!2.06e-24!12;UBERON:0004810!2.06e-24!12;UBERON:0002113!4.53e-21!27;UBERON:0003918!4.53e-21!27;UBERON:0005095!4.53e-21!27;UBERON:0007687!4.53e-21!27;UBERON:0006853!1.02e-19!3;UBERON:0007685!1.02e-19!3;UBERON:0004134!1.02e-19!3;UBERON:0005172!3.27e-19!55;UBERON:0005173!3.27e-19!55;UBERON:0004211!4.20e-18!16;UBERON:0001285!4.20e-18!16;UBERON:0007684!4.20e-18!16;UBERON:0003220!4.20e-18!16;UBERON:0004208!4.20e-18!16;UBERON:0000489!1.68e-17!32;UBERON:0002417!4.85e-17!61;UBERON:0000916!4.85e-17!61;UBERON:0006555!5.47e-17!17;UBERON:0005103!5.47e-17!17;UBERON:0000083!5.47e-17!17;UBERON:0009201!5.47e-17!17;UBERON:0004819!5.47e-17!17;UBERON:0006553!5.47e-17!17;UBERON:0003074!5.47e-17!17;UBERON:0003060!5.47e-17!17;UBERON:0000080!5.36e-16!18;UBERON:0002120!5.36e-16!18;UBERON:0004875!5.36e-16!18;UBERON:0005721!5.36e-16!18;UBERON:0005754!5.36e-16!18;UBERON:0007297!5.36e-16!18;UBERON:0006554!8.68e-15!44;UBERON:0001008!2.05e-14!45;UBERON:0004876!2.60e-14!20;UBERON:0003887!1.37e-13!21;UBERON:0001225!8.94e-12!13;UBERON:0008987!8.94e-12!13;UBERON:0005177!1.63e-11!107;UBERON:0000058!8.29e-11!26;UBERON:0001851!1.60e-09!16;UBERON:0003064!1.97e-09!37;UBERON:0009569!2.79e-09!113;UBERON:0000353!6.00e-09!17;UBERON:0003103!1.03e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.23e-27;3!UBERON:0007685;2.23e-27;3!UBERON:0004134;2.23e-27;3!UBERON:0004211;6.41e-09;10!UBERON:0009773;6.41e-09;10!UBERON:0001231;6.41e-09;10!UBERON:0004810;6.41e-09;10!UBERON:0002110;7.02e-08;3!UBERON:0002423;1.00e-07;25!UBERON:0001225;1.40e-07;12!UBERON:0008987;1.40e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.38e-27,3;UBERON:0007685,2.38e-27,3;UBERON:0004134,2.38e-27,3;UBERON:0005172,2.82e-09,54;UBERON:0005173,2.82e-09,54;UBERON:0004810,6.54e-09,10;UBERON:0002417,2.35e-08,60;UBERON:0000916,2.35e-08,60;UBERON:0002110,5.93e-08,3;UBERON:0006242,5.93e-08,3;UBERON:0009497,9.91e-08,25;UBERON:0000015,9.91e-08,25;UBERON:0002423,9.91e-08,25;UBERON:0006235,9.91e-08,25;UBERON:0004161,9.91e-08,25;UBERON:0001225,1.42e-07,12;UBERON:0008987,1.42e-07,12;UBERON:0005177,5.70e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.27438136522519,2.49322802678617,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.14950798265875,0,0,0,0,0,0,0,0,0,1.02418136999391,0.576911008668165,1.28066733322951,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56630256826494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.27438136522519,2.49322802678617,0.895499018888713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.14950798265875,0,0,0,0,0,0,0,0,0,1.02418136999391,0.576911008668165,1.28066733322951,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56630256826494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@FXYD2 | |||
}} | }} |
Latest revision as of 22:06, 15 September 2015
Short description: | p11@FXYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FXYD2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 214bp_to_ENST00000534383_5end |
EntrezGene: | FXYD2 |
HGNC: | 4026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.38e-27 | 3 |
kidney cortex tubule cell | 2.38e-27 | 3 |
epithelial cell of proximal tubule | 2.38e-27 | 3 |
kidney tubule cell | 6.54e-09 | 10 |
nephron tubule epithelial cell | 6.54e-09 | 10 |
kidney cortical cell | 1.42e-07 | 12 |
renal cortical epithelial cell | 1.42e-07 | 12 |
hepatocyte | 1.73e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.38e-27 | 3 |
region of nephron tubule | 2.38e-27 | 3 |
proximal tubule | 2.38e-27 | 3 |
abdomen element | 2.82e-09 | 54 |
abdominal segment element | 2.82e-09 | 54 |
nephron tubule epithelium | 6.54e-09 | 10 |
abdominal segment of trunk | 2.35e-08 | 60 |
abdomen | 2.35e-08 | 60 |
gallbladder | 5.93e-08 | 3 |
gall bladder primordium | 5.93e-08 | 3 |
epithelium of foregut-midgut junction | 9.91e-08 | 25 |
anatomical boundary | 9.91e-08 | 25 |
hepatobiliary system | 9.91e-08 | 25 |
foregut-midgut junction | 9.91e-08 | 25 |
septum transversum | 9.91e-08 | 25 |
cortex of kidney | 1.42e-07 | 12 |
renal parenchyma | 1.42e-07 | 12 |
trunk region element | 5.70e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.47e-11 | 2 |