FFCP PHASE1:Hg19::chr19:38743940..38743957,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:38743940..38743957,- | |||
|coexpression_cluster_id=C1329 | |||
|description=CAGE_peak_at_chr19:38743940..38743957,- | |description=CAGE_peak_at_chr19:38743940..38743957,- | ||
|id=chr19:38743940..38743957,- | |id=chr19:38743940..38743957,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;5.98e-11;65!UBERON:0004872;9.96e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-66!115;UBERON:0001049!8.86e-15!57;UBERON:0005068!8.86e-15!57;UBERON:0006241!8.86e-15!57;UBERON:0007135!8.86e-15!57;UBERON:0002616!1.06e-13!59;UBERON:0003075!1.09e-12!86;UBERON:0007284!1.09e-12!86;UBERON:0002346!2.21e-12!90;UBERON:0000955!6.87e-12!69;UBERON:0006238!6.87e-12!69;UBERON:0001017!2.74e-11!82;UBERON:0005743!3.22e-11!86;UBERON:0000073!7.29e-11!94;UBERON:0001016!7.29e-11!94;UBERON:0002298!7.26e-10!8;UBERON:0003080!1.33e-09!42;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0000062!1.54e-08!511;UBERON:0000153!2.20e-08!129;UBERON:0007811!2.20e-08!129;UBERON:0002020!2.87e-08!34;UBERON:0003528!2.87e-08!34;UBERON:0001893!3.23e-08!34;UBERON:0004732!3.37e-08!13;UBERON:0000033!4.11e-08!123;UBERON:0000475!1.15e-07!365;UBERON:0003135!1.21e-07!11;UBERON:0002791!1.32e-07!33;UBERON:0003688!2.87e-07!6;UBERON:0002358!2.87e-07!6;UBERON:0003684!2.87e-07!6;UBERON:0001178!2.87e-07!6;UBERON:0004733!4.76e-07!12;UBERON:0002028!4.76e-07!12;UBERON:0007277!4.76e-07!12;UBERON:0000481!5.38e-07!347;UBERON:0000468!5.67e-07!659;UBERON:0001869!5.71e-07!32;UBERON:0004121!8.52e-07!169;UBERON:0003076!8.57e-07!15;UBERON:0003057!8.57e-07!15;UBERON:0000924!9.02e-07!173;UBERON:0006601!9.02e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.17e-14;114!UBERON:0006947;9.06e-09;3!UBERON:0004054;9.06e-09;3!UBERON:0004151;3.14e-08;3!UBERON:0003135;5.35e-08;11!UBERON:0003978;6.45e-08;3!UBERON:0000946;6.45e-08;3!UBERON:0004921;1.27e-07;33!UBERON:0000160;1.40e-07;17!UBERON:0005409;3.21e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.06e-54,114;UBERON:0005409,2.70e-09,25;UBERON:0006947,7.49e-09,3;UBERON:0004054,7.49e-09,3;UBERON:0004151,3.15e-08,3;UBERON:0003135,5.47e-08,11;UBERON:0003978,5.52e-08,3;UBERON:0009751,5.52e-08,3;UBERON:0000946,5.52e-08,3;UBERON:0002523,5.52e-08,3;UBERON:0005983,5.52e-08,3;UBERON:0002165,5.52e-08,3;UBERON:0002062,5.52e-08,3;UBERON:0007280,5.52e-08,3;UBERON:0000160,1.55e-07,17;UBERON:0004921,4.19e-07,118 | |||
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| ||
|short_description=p@chr19:38743940..38743957,- | |short_description=p@chr19:38743940..38743957,- | ||
}} | }} |
Latest revision as of 07:17, 26 July 2015
Short description: | p@chr19:38743940..38743957, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:38743940..38743957, - |
Coexpression cluster: | C1329_aorta_retina_uterus_smooth_gall_heart_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.06e-54 | 114 |
gastrointestinal system | 2.70e-09 | 25 |
male genital duct | 7.49e-09 | 3 |
internal male genitalia | 7.49e-09 | 3 |
cardiac chamber | 3.15e-08 | 3 |
male reproductive organ | 5.47e-08 | 11 |
valve | 5.52e-08 | 3 |
cardiac mesenchyme | 5.52e-08 | 3 |
cardial valve | 5.52e-08 | 3 |
tunica intima | 5.52e-08 | 3 |
heart layer | 5.52e-08 | 3 |
endocardium | 5.52e-08 | 3 |
endocardial cushion | 5.52e-08 | 3 |
presumptive endocardium | 5.52e-08 | 3 |
intestine | 1.55e-07 | 17 |
subdivision of digestive tract | 4.19e-07 | 118 |