FFCP PHASE1:Hg19::chr14:22959438..22959459,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12079 | |HGNC=12079 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000390489,uc001wem.3_5end | |association_with_transcript=-19bp_to_ENST00000390489,uc001wem.3_5end | ||
|cluster_id=chr14:22959438..22959459,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_TRAJ48_5end | |description=CAGE_peak_2_at_TRAJ48_5end | ||
|id=chr14:22959438..22959459,+ | |id=chr14:22959438..22959459,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.66e-34!53;CL:0000051!3.66e-34!53;CL:0000945!3.88e-34!24;CL:0000826!3.88e-34!24;CL:0000838!6.71e-32!52;CL:0000236!3.71e-29!14;CL:0002087!9.78e-14!119;CL:0000738!7.38e-13!140;CL:0002031!1.11e-10!124;CL:0000791!3.12e-10!18;CL:0000789!3.12e-10!18;CL:0002420!3.12e-10!18;CL:0002419!3.12e-10!18;CL:0000790!3.12e-10!18;CL:0000037!3.54e-09!172;CL:0000566!3.54e-09!172;CL:0000988!2.64e-08!182;CL:0002032!3.65e-08!165;CL:0000837!3.65e-08!165;CL:0000815!1.66e-07!2;CL:0000792!1.66e-07!2;CL:0002677!1.66e-07!2;CL:0000084!5.30e-07!25;CL:0000827!5.30e-07!25 | |ontology_enrichment_celltype=CL:0000542!3.66e-34!53;CL:0000051!3.66e-34!53;CL:0000945!3.88e-34!24;CL:0000826!3.88e-34!24;CL:0000838!6.71e-32!52;CL:0000236!3.71e-29!14;CL:0002087!9.78e-14!119;CL:0000738!7.38e-13!140;CL:0002031!1.11e-10!124;CL:0000791!3.12e-10!18;CL:0000789!3.12e-10!18;CL:0002420!3.12e-10!18;CL:0002419!3.12e-10!18;CL:0000790!3.12e-10!18;CL:0000037!3.54e-09!172;CL:0000566!3.54e-09!172;CL:0000988!2.64e-08!182;CL:0002032!3.65e-08!165;CL:0000837!3.65e-08!165;CL:0000815!1.66e-07!2;CL:0000792!1.66e-07!2;CL:0002677!1.66e-07!2;CL:0000084!5.30e-07!25;CL:0000827!5.30e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.36e-87;13!CL:0000945;3.37e-58;24!CL:0000542;1.57e-28;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.31e-81,14;CL:0000945,3.08e-58,24;CL:0000826,3.08e-58,24;CL:0000542,2.61e-37,53;CL:0000051,2.61e-37,53;CL:0000838,5.58e-32,52;CL:0002087,1.96e-16,115;CL:0000738,1.00e-13,136;CL:0002031,3.99e-13,120;CL:0002032,2.08e-11,161;CL:0000837,2.08e-11,161;CL:0000037,6.99e-11,168;CL:0000988,2.90e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.57e-28;53!UBERON:0001045;2.95e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;2.95e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.66e-15,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.67e-11!7;UBERON:0003408!4.53e-08!10;UBERON:0002370!5.88e-08!4;UBERON:0005058!5.88e-08!4;UBERON:0009113!5.88e-08!4;UBERON:0003295!5.88e-08!4;UBERON:0005562!5.88e-08!4 | |ontology_enrichment_uberon=UBERON:0004177!2.67e-11!7;UBERON:0003408!4.53e-08!10;UBERON:0002370!5.88e-08!4;UBERON:0005058!5.88e-08!4;UBERON:0009113!5.88e-08!4;UBERON:0003295!5.88e-08!4;UBERON:0005562!5.88e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.54e-15;1!UBERON:0001961;1.54e-15;1!UBERON:0001744;1.54e-15;1!UBERON:0001042;1.54e-15;1!UBERON:0001735;1.54e-15;1!UBERON:0001154;2.95e-15;1!UBERON:0001153;2.95e-15;1!UBERON:0009854;2.95e-15;1!UBERON:0006562;2.00e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.06e-15,1;UBERON:0001961,2.06e-15,1;UBERON:0001744,2.06e-15,1;UBERON:0001735,2.06e-15,1;UBERON:0001154,2.38e-15,1;UBERON:0001153,2.38e-15,1;UBERON:0001045,2.38e-15,1 | |||
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| ||
|short_description=p2@TRAJ48 | |short_description=p2@TRAJ48 | ||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p2@TRAJ48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAJ48_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -19bp_to_ENST00000390489, uc001wem.3_5end |
EntrezGene: | NA |
HGNC: | 12079 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.31e-81 | 14 |
lymphocyte of B lineage | 3.08e-58 | 24 |
pro-B cell | 3.08e-58 | 24 |
lymphocyte | 2.61e-37 | 53 |
common lymphoid progenitor | 2.61e-37 | 53 |
lymphoid lineage restricted progenitor cell | 5.58e-32 | 52 |
nongranular leukocyte | 1.96e-16 | 115 |
leukocyte | 1.00e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 3.99e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.08e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.08e-11 | 161 |
hematopoietic stem cell | 6.99e-11 | 168 |
hematopoietic cell | 2.90e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.06e-15 | 1 |
mucosa-associated lymphoid tissue | 2.06e-15 | 1 |
lymphoid tissue | 2.06e-15 | 1 |
tonsillar ring | 2.06e-15 | 1 |
vermiform appendix | 2.38e-15 | 1 |
caecum | 2.38e-15 | 1 |
midgut | 2.38e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.66e-15 | 1 |