FFCP PHASE1:Hg19::chr1:115782479..115782490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:115782479..115782490,+ | |||
|coexpression_cluster_id=C3851 | |||
|description=CAGE_peak_at_chr1:115782479..115782490,+ | |description=CAGE_peak_at_chr1:115782479..115782490,+ | ||
|id=chr1:115782479..115782490,+ | |id=chr1:115782479..115782490,+ | ||
|ontology_enrichment_celltype=CL:0002620!4.72e-51!23;CL:0000057!3.15e-22!75;CL:0000197!3.90e-15!6;CL:0000098!3.90e-15!6;CL:0002167!3.90e-15!6;CL:0000055!9.43e-10!180 | |ontology_enrichment_celltype=CL:0002620!4.72e-51!23;CL:0000057!3.15e-22!75;CL:0000197!3.90e-15!6;CL:0000098!3.90e-15!6;CL:0002167!3.90e-15!6;CL:0000055!9.43e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.48e-42;23!CL:0000222;4.83e-14;1!CL:0000197;2.78e-09;6!CL:0000098;2.78e-09;6!CL:0002167;2.78e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.22e-42,23;CL:0000057,3.67e-15,76;CL:0000197,2.78e-09,6;CL:0000098,2.78e-09,6;CL:0002167,2.78e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!7.19e-28!5;DOID:450!7.19e-28!5;DOID:66!7.19e-28!5;DOID:423!7.19e-28!5;DOID:0080000!7.19e-28!5;DOID:11722!7.19e-28!5;DOID:2513!2.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:17;6.10e-23;5!DOID:450;6.10e-23;5!DOID:66;6.10e-23;5!DOID:423;6.10e-23;5!DOID:0080000;6.10e-23;5!DOID:11722;6.10e-23;5!DOID:2513;3.08e-14;1!DOID:3451;9.25e-08;2!DOID:4159;9.25e-08;2!DOID:0060122;9.25e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.47e-23,5;DOID:450,3.47e-23,5;DOID:66,3.47e-23,5;DOID:423,3.47e-23,5;DOID:0080000,3.47e-23,5;DOID:11722,3.47e-23,5;DOID:2513,3.08e-14,1;DOID:3451,9.25e-08,2;DOID:4159,9.25e-08,2;DOID:0060122,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.78e-32!40;UBERON:0002199!6.04e-32!45;UBERON:0002416!6.04e-32!45;UBERON:0003102!6.67e-15!95;UBERON:0007195!5.89e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.20e-19;41!UBERON:0002199;3.11e-19;46!UBERON:0002416;3.11e-19;46!UBERON:0003102;1.52e-14;50!UBERON:0007195;1.18e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.43e-29,41;UBERON:0002199,6.66e-26,46;UBERON:0002416,6.66e-26,46;UBERON:0007195,1.42e-13,1;UBERON:0003102,2.05e-11,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,2.69084453533293,1.70845911054854,0.423863802319124,1.80054657650641,0.824420233907511,0.515281080091258,0.18611685633159,3.20675031258406,0.779496041289589,2.77677151668526,1.01254888506529,0.646584227275248,1.77504796258307,1.20902517873168,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.57702415033935,2.22568688486155,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.77598969154519,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,1.10961172300523,0,0,0,0.457680136793847,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,2.69084453533293,1.70845911054854,0.423863802319124,1.80054657650641,0.824420233907511,0.515281080091258,0.18611685633159,3.20675031258406,0.779496041289589,2.77677151668526,1.01254888506529,0.646584227275248,1.77504796258307,1.20902517873168,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.892144943985809,1.57702415033935,2.22568688486155,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.77598969154519,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,1.10961172300523,0,0,0,0.457680136793847,0.604923695052956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:115782479..115782490,+ | |short_description=p@chr1:115782479..115782490,+ | ||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:115782479..115782490, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115782479..115782490, + |
Coexpression cluster: | C3851_basal_Fibroblast_mesodermal_Olfactory_mesenchymal_Myoblast_neurofibroma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.22e-42 | 23 |
fibroblast | 3.67e-15 | 76 |
receptor cell | 2.78e-09 | 6 |
sensory epithelial cell | 2.78e-09 | 6 |
olfactory epithelial cell | 2.78e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.43e-29 | 41 |
integument | 6.66e-26 | 46 |
integumental system | 6.66e-26 | 46 |
stroma of bone marrow | 1.42e-13 | 1 |
surface structure | 2.05e-11 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.47e-23 | 5 |
myotonic disease | 3.47e-23 | 5 |
muscle tissue disease | 3.47e-23 | 5 |
myopathy | 3.47e-23 | 5 |
muscular disease | 3.47e-23 | 5 |
myotonic dystrophy | 3.47e-23 | 5 |
basal cell carcinoma | 3.08e-14 | 1 |
skin carcinoma | 9.25e-08 | 2 |
skin cancer | 9.25e-08 | 2 |
integumentary system cancer | 9.25e-08 | 2 |