FFCP PHASE1:Hg19::chr11:33722600..33722612,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:33722600..33722612,+
|short_description=p@chr11:33722600..33722612,+
|description=CAGE_peak_at_chr11:33722600..33722612,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:33722600..33722612,+ | |||
|description=CAGE_peak_at_chr11:33722600..33722612,+ | |||
|id=chr11:33722600..33722612,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.78e-12!248;CL:0000220!2.43e-12!246;CL:0000115!1.32e-09!35;CL:0002139!3.23e-09!24;CL:0000071!6.21e-09!18;CL:0002546!6.21e-09!18;CL:0002078!8.15e-08!44;CL:0002368!8.89e-08!13;CL:0000066!9.73e-08!254;CL:1000449!4.99e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.99e-11;9!CL:0002632;2.99e-11;9!CL:1000449;3.70e-10;15!CL:0002368;3.94e-10;13!CL:0002328;1.02e-09;3!CL:0000307;2.67e-09;3!CL:0002188;5.65e-09;5!CL:1000497;8.56e-09;17!CL:0002518;8.56e-09;17!CL:0000115;4.56e-08;36!CL:0002681;2.02e-07;12!CL:0002584;2.02e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,3.68e-11,9;CL:0002632,3.68e-11,9;CL:1000449,1.89e-10,15;CL:0002368,4.58e-10,13;CL:0000115,7.05e-10,36;CL:0002328,1.10e-09,3;CL:0000068,3.42e-09,3;CL:0000069,3.42e-09,3;CL:0000307,3.42e-09,3;CL:0000377,3.42e-09,3;CL:0002188,3.46e-09,5;CL:1000497,4.78e-09,17;CL:0002518,4.78e-09,17;CL:0002078,1.32e-08,45;CL:0002321,5.35e-08,250;CL:0002681,1.21e-07,12;CL:0002584,1.21e-07,12;CL:0000066,6.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;2.67e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.85e-13!312;UBERON:0000025!1.39e-12!194;UBERON:0000483!1.67e-12!309;UBERON:0004111!7.62e-12!241;UBERON:0003914!1.48e-09!118;UBERON:0001986!6.21e-09!18;UBERON:0004638!6.21e-09!18;UBERON:0004852!6.21e-09!18;UBERON:0000477!8.67e-09!286;UBERON:0000055!2.01e-08!69;UBERON:0000487!2.91e-08!22;UBERON:0002049!4.09e-08!79;UBERON:0007798!4.09e-08!79;UBERON:0001981!5.21e-08!60;UBERON:0007500!5.21e-08!60;UBERON:0004537!5.21e-08!60;UBERON:0006965!5.21e-08!60;UBERON:0004211!4.99e-07!16;UBERON:0001285!4.99e-07!16;UBERON:0007684!4.99e-07!16;UBERON:0003220!4.99e-07!16;UBERON:0004208!4.99e-07!16;UBERON:0004872!9.33e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.70e-10;15!UBERON:0004819;3.70e-10;15!UBERON:0001285;3.70e-10;15!UBERON:0007684;3.70e-10;15!UBERON:0004815;1.02e-09;3!UBERON:0002031;1.02e-09;3!UBERON:0002118;1.15e-08;5!UBERON:0000353;1.04e-07;15!UBERON:0001225;2.02e-07;12!UBERON:0008987;2.02e-07;12!UBERON:0000490;5.93e-07;33!UBERON:0006554;7.75e-07;30!UBERON:0001008;7.75e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.89e-10,15;UBERON:0009773,1.89e-10,15;UBERON:0001231,1.89e-10,15;UBERON:0001285,1.89e-10,15;UBERON:0007684,1.89e-10,15;UBERON:0004208,1.89e-10,15;UBERON:0006555,1.05e-09,16;UBERON:0004819,1.05e-09,16;UBERON:0004815,1.10e-09,3;UBERON:0002031,1.10e-09,3;UBERON:0002118,1.89e-08,5;UBERON:0000353,6.20e-08,15;UBERON:0003914,9.75e-08,117;UBERON:0001225,1.21e-07,12;UBERON:0008987,1.21e-07,12 | |||
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| ||
|short_description=p@chr11:33722600..33722612,+ | |||
}} | }} |
Latest revision as of 21:39, 23 July 2015
Short description: | p@chr11:33722600..33722612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:33722600..33722612, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 3.68e-11 | 9 |
epithelial cell of lower respiratory tract | 3.68e-11 | 9 |
epithelial cell of nephron | 1.89e-10 | 15 |
respiratory epithelial cell | 4.58e-10 | 13 |
endothelial cell | 7.05e-10 | 36 |
bronchial epithelial cell | 1.10e-09 | 3 |
duct epithelial cell | 3.42e-09 | 3 |
branched duct epithelial cell | 3.42e-09 | 3 |
tracheal epithelial cell | 3.42e-09 | 3 |
tracheoblast | 3.42e-09 | 3 |
glomerular endothelial cell | 3.46e-09 | 5 |
kidney cell | 4.78e-09 | 17 |
kidney epithelial cell | 4.78e-09 | 17 |
meso-epithelial cell | 1.32e-08 | 45 |
embryonic cell | 5.35e-08 | 250 |
kidney cortical cell | 1.21e-07 | 12 |
renal cortical epithelial cell | 1.21e-07 | 12 |
epithelial cell | 6.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.89e-10 | 15 |
renal tubule | 1.89e-10 | 15 |
nephron tubule | 1.89e-10 | 15 |
nephron | 1.89e-10 | 15 |
uriniferous tubule | 1.89e-10 | 15 |
nephrogenic mesenchyme | 1.89e-10 | 15 |
excretory tube | 1.05e-09 | 16 |
kidney epithelium | 1.05e-09 | 16 |
lower respiratory tract epithelium | 1.10e-09 | 3 |
epithelium of bronchus | 1.10e-09 | 3 |
right ovary | 1.89e-08 | 5 |
parenchyma | 6.20e-08 | 15 |
epithelial tube | 9.75e-08 | 117 |
cortex of kidney | 1.21e-07 | 12 |
renal parenchyma | 1.21e-07 | 12 |