FFCP PHASE1:Hg19::chr15:39874839..39874842,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39874839..39874842,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39874839..39874842,+ | |description=CAGE_peak_at_chr15:39874839..39874842,+ | ||
|id=chr15:39874839..39874842,+ | |id=chr15:39874839..39874842,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.74e-09!24;CL:0002371!2.84e-08!591;CL:0000144!2.13e-07!625;CL:0000115!8.70e-07!35 | |ontology_enrichment_celltype=CL:0002139!4.74e-09!24;CL:0002371!2.84e-08!591;CL:0000144!2.13e-07!625;CL:0000115!8.70e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000197;4.15e-19;6!CL:0000098;4.15e-19;6!CL:0002167;4.15e-19;6!CL:0002580;4.92e-11;3!CL:0002615;9.30e-11;3!CL:0000346;1.10e-10;3!CL:1000428;1.10e-10;3!CL:0000136;3.43e-09;13!CL:0002616;7.54e-09;1!CL:0002559;9.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.86e-19,6;CL:0000098,8.86e-19,6;CL:0002167,8.86e-19,6;CL:0002580,4.82e-11,3;CL:0002615,8.67e-11,3;CL:0000346,1.16e-10,3;CL:1000428,1.16e-10,3;CL:0002616,8.15e-09,1;CL:0000136,5.26e-08,15;CL:0002559,9.98e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3369;7.54e-09;1!DOID:2513;1.97e-08;1!DOID:4235;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,6.50e-09,1;DOID:2513,2.13e-08,1;DOID:4235,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.74e-09!69;UBERON:0002049!7.37e-09!79;UBERON:0007798!7.37e-09!79;UBERON:0004872!1.58e-08!84;UBERON:0001981!4.73e-08!60;UBERON:0007500!4.73e-08!60;UBERON:0004537!4.73e-08!60;UBERON:0006965!4.73e-08!60;UBERON:0004923!5.88e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.83e-11;6!UBERON:0002358;1.83e-11;6!UBERON:0003684;1.83e-11;6!UBERON:0001178;1.83e-11;6!UBERON:0000412;1.10e-10;3!UBERON:0001992;1.10e-10;3!UBERON:0004457;8.41e-08;9!UBERON:0000042;8.41e-08;9!UBERON:0000310;3.50e-07;10!UBERON:0002073;9.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.74e-11,6;UBERON:0002358,1.74e-11,6;UBERON:0003684,1.74e-11,6;UBERON:0001178,1.74e-11,6;UBERON:0000412,1.16e-10,3;UBERON:0001992,1.16e-10,3;UBERON:0004923,1.93e-07,66;UBERON:0000310,3.25e-07,10;UBERON:0002073,9.98e-07,5;UBERON:0005086,9.98e-07,5 | |||
|phase1_expression=1.45342703416445,0.856402095563933,1.40954404095971,3.00219895059391,0,2.61701557230111,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0.863077176966451,0,0,0.689491361473237,0,0,0.564727018627814,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0,0.66944122552934,0.402829317109147,0,0.488124115096339,0.735326160691737,0,0.892997282840798,0,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0,2.98183171017191,1.13967460498122,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0,1.5324389789951,0.751190294532984,0.453728732640084,0.179389635688862,1.06778694409284,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0.276149695926898,0.484938170456436,0,0.302256294682921,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,1.07057393278297,1.10391690523754,1.05427273493442,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0.215714200818617,0,0,1.66435439510497,0.30239029332968,0.496215615637554,2.76231551918512,3.64858122762996,0.768834895534206,0.511707249066704,1.28683136914886,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,1.24415835064723,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0.467426619694449,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0,0.796191777397232,2.80019435264208,0,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.45342703416445,0.856402095563933,1.40954404095971,3.00219895059391,0,2.61701557230111,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0.863077176966451,0,0,0.689491361473237,0,0,0.564727018627814,0,0,0.306083892370903,0,0,0.329851300186716,0,0,0.580418477257168,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0,0.66944122552934,0.402829317109147,0,0.488124115096339,0.735326160691737,0,0.892997282840798,0,0.337834441449967,1.53316637465883,0,0.366403487860815,0,0,0,2.98183171017191,1.13967460498122,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.23633464639278,0,0,0,0,0,0,1.5324389789951,0.751190294532984,0.453728732640084,0.179389635688862,1.06778694409284,0.211931901159562,0.300091096084402,0,0,0.37223371266318,0.337552664482532,0.389748020644795,0.252433774244115,0.276149695926898,0.484938170456436,0,0.302256294682921,0.339121184620975,0,0.272746120590835,0,0,0,0,0,0,0,0,2.57296375277154,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.577465791044295,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,1.45579603071565,1.07057393278297,1.10391690523754,1.05427273493442,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0.215714200818617,0,0,1.66435439510497,0.30239029332968,0.496215615637554,2.76231551918512,3.64858122762996,0.768834895534206,0.511707249066704,1.28683136914886,0,0,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,0.0890320356467374,0,0.384380134730212,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0.842516912477962,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,1.24415835064723,0.179736702294654,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0.467426619694449,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0,0,0.796191777397232,2.80019435264208,0,0.336749488765919,0,0.192619830407303,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0195626881269,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:39874839..39874842,+ | |short_description=p@chr15:39874839..39874842,+ | ||
}} | }} |
Latest revision as of 01:14, 25 July 2015
Short description: | p@chr15:39874839..39874842, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874839..39874842, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.86e-19 | 6 |
sensory epithelial cell | 8.86e-19 | 6 |
olfactory epithelial cell | 8.86e-19 | 6 |
preadipocyte of the breast | 4.82e-11 | 3 |
adipocyte of omentum tissue | 8.67e-11 | 3 |
hair follicle dermal papilla cell | 1.16e-10 | 3 |
stem cell of epidermis | 1.16e-10 | 3 |
perirenal adipocyte cell | 8.15e-09 | 1 |
fat cell | 5.26e-08 | 15 |
hair follicle cell | 9.98e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.74e-11 | 6 |
peritoneum | 1.74e-11 | 6 |
abdominal cavity | 1.74e-11 | 6 |
visceral peritoneum | 1.74e-11 | 6 |
dermal papilla | 1.16e-10 | 3 |
papillary layer of dermis | 1.16e-10 | 3 |
organ component layer | 1.93e-07 | 66 |
breast | 3.25e-07 | 10 |
hair follicle | 9.98e-07 | 5 |
hair follicle placode | 9.98e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 6.50e-09 | 1 |
basal cell carcinoma | 2.13e-08 | 1 |
spindle cell sarcoma | 4.07e-08 | 1 |