FFCP PHASE1:Hg19::chr15:58880827..58880833,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:58880827..58880833,- | |||
|description=CAGE_peak_at_chr15:58880827..58880833,- | |description=CAGE_peak_at_chr15:58880827..58880833,- | ||
|id=chr15:58880827..58880833,- | |id=chr15:58880827..58880833,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.84e-12;1 | |||
|ontology_enrichment_disease=DOID:14566!3.01e-13!239;DOID:162!3.23e-13!235;DOID:0050687!1.45e-09!143;DOID:0050686!4.46e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:630;9.60e-12;1!DOID:0050177;9.60e-12;1!DOID:0050427;9.60e-12;1!DOID:4468;9.18e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.05e-12,1;DOID:0050177,5.05e-12,1;DOID:0050427,5.05e-12,1;DOID:4468,9.44e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.91e-09;5!UBERON:0002294;4.07e-07;7!UBERON:0001173;4.07e-07;7!UBERON:0003513;7.41e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,2.69e-11,9;UBERON:0001173,2.69e-11,9;UBERON:0004912,2.69e-11,9;UBERON:0002021,4.06e-09,5;UBERON:0002394,4.66e-08,6;UBERON:0003928,4.66e-08,6;UBERON:0003513,7.63e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.56386155736164,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.375355559615893,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.434343920002738,0.205476322550383,0,0.560425719967636,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0.769350375349168,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.106824071127473,0.962479855263359,0,0.371606350251437,0,1.35169502361987,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.677167111206413,0.1605880751037,0,0.851692475380653,0.687010689511529,0,0,0,0.19538809540204,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0.568272293612826,0.47748896947538,0,0,0,0.281338832821026,0.111308705022906,0,1.05562704063997,0,0,0.251932747854276,0.409074730008619,0,0,0.0898683511473268,3.75944466818779,1.53471711068062,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0,0,0.689486746482929,0.291604613383254,0,0,0.482385754501632,0,0.331737779793674,0.295547618953547,0,0.32681539055697,0.139423744278603,0.153900517007594,0.113942055847001,0.46112780877612,0,0.108647371922008,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,3.10142335502381,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0.661983911750998,0.627865836814451,2.38944859545918,0.284609546029793,0,0,0.489961987071888,0.0870592065804026,0.873633341210151,0.343972064943233,0.774050650312681,0.219267951258557,0.656923656425674,0,0,0,0,0.19871461170299,0,2.34661659281764,0.240476460754601,0,0.999048047910651,0,0.343609788497747,0.343189995723929,0,0.248505071130865,0.471388069233591,0.271808412147228,0.209205692624666,0.101998217636322,0.866851769704557,0,0,0,0.859530882839914,0,0.279282401272254,0,0.717873024576814,0,0,0.446342914883745,0,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0.803765742325096,0,0,0,0,0,0.335434687599266,0.315222829196793,0,0.211200673038813,0,0.767660789277781,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.453248366080503,0,0,0.129282956361551,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0,0,0.249960815924213,0.151649117541648,0.285465333544967,0.705797459094515,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0.385239660814607,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0.368211900503681,0,0,0.383683113910955,0,0.157265941855896,0.109209638192014,0.33946505990805,0.425149840203366,0.123935764259002,0,0.318004350653419,1.81382013502883,0,0,0,0.0642292250964595,0,1.11743701340006,1.23069818544453,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.115525666150338,1.52552838186867,0,0.397832444232549,0,0.20170506870352,0,0.523813388962845,0,0.295712172434091,0,0,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0.131545547125698,0,0.222462803784138,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,1.39086617842064,0,0.207216164163037,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0,0,0.237840181555137,0.22589216407792,0,0,0.231522474323834,0.218559560503957,2.82190377816914,0,0,0.392616934229891,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0.517164979309476,0.213233981900981,0,0.129177819672012,0.248298857183432,0.224263725161227,0,0.202117188958219,0,0,0.0673520530145875,0,0.99798106963804,0.0814032686109745,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0,0.402547587182052,1.9234109538194 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0,0,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,1.56386155736164,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.393419540227666,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0.375355559615893,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.134831308160164,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0.882926198829301,0,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.434343920002738,0.205476322550383,0,0.560425719967636,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0.541892875087706,0,0,0,0,0,0,0.769350375349168,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.106824071127473,0.962479855263359,0,0.371606350251437,0,1.35169502361987,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0.677167111206413,0.1605880751037,0,0.851692475380653,0.687010689511529,0,0,0,0.19538809540204,0,0,0.270455678475983,0.66614393599564,0,0,0,0,0,0.568272293612826,0.47748896947538,0,0,0,0.281338832821026,0.111308705022906,0,1.05562704063997,0,0,0.251932747854276,0.409074730008619,0,0,0.0898683511473268,3.75944466818779,1.53471711068062,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0,0,0.689486746482929,0.291604613383254,0,0,0.482385754501632,0,0.331737779793674,0.295547618953547,0,0.32681539055697,0.139423744278603,0.153900517007594,0.113942055847001,0.46112780877612,0,0.108647371922008,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,3.10142335502381,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.468528891450678,0,0,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0.661983911750998,0.627865836814451,2.38944859545918,0.284609546029793,0,0,0.489961987071888,0.0870592065804026,0.873633341210151,0.343972064943233,0.774050650312681,0.219267951258557,0.656923656425674,0,0,0,0,0.19871461170299,0,2.34661659281764,0.240476460754601,0,0.999048047910651,0,0.343609788497747,0.343189995723929,0,0.248505071130865,0.471388069233591,0.271808412147228,0.209205692624666,0.101998217636322,0.866851769704557,0,0,0,0.859530882839914,0,0.279282401272254,0,0.717873024576814,0,0,0.446342914883745,0,0.720599767084807,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.0846733320657845,0.795229689809303,0.136203406111576,0.803765742325096,0,0,0,0,0,0.335434687599266,0.315222829196793,0,0.211200673038813,0,0.767660789277781,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.453248366080503,0,0,0.129282956361551,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0.250381861413,0,0.110929051536852,0,0,0.249960815924213,0.151649117541648,0.285465333544967,0.705797459094515,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0,0,0.302461847526478,0,0,0,0,0,0,0.53168342911599,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0.385239660814607,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0,0,0.368211900503681,0,0,0.383683113910955,0,0.157265941855896,0.109209638192014,0.33946505990805,0.425149840203366,0.123935764259002,0,0.318004350653419,1.81382013502883,0,0,0,0.0642292250964595,0,1.11743701340006,1.23069818544453,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0.235939446695481,0.183428598521679,0.115525666150338,1.52552838186867,0,0.397832444232549,0,0.20170506870352,0,0.523813388962845,0,0.295712172434091,0,0,0.413373593002368,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.342976018874837,0,0.131545547125698,0,0.222462803784138,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,1.39086617842064,0,0.207216164163037,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0,0,0,0.237840181555137,0.22589216407792,0,0,0.231522474323834,0.218559560503957,2.82190377816914,0,0,0.392616934229891,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0.730336388246517,0,0.286679166302903,0.315543124386369,0,0,0,0,0.924351257262837,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0.250707539292375,0.0757786982182394,0,0,0.517164979309476,0.213233981900981,0,0.129177819672012,0.248298857183432,0.224263725161227,0,0.202117188958219,0,0,0.0673520530145875,0,0.99798106963804,0.0814032686109745,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0,0.402547587182052,1.9234109538194 | ||
|short_description=p@chr15:58880827..58880833,- | |short_description=p@chr15:58880827..58880833,- | ||
}} | }} |
Latest revision as of 02:56, 25 July 2015
Short description: | p@chr15:58880827..58880833, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:58880827..58880833, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
biliary system | 2.69e-11 | 9 |
biliary tree | 2.69e-11 | 9 |
biliary bud | 2.69e-11 | 9 |
occipital lobe | 4.06e-09 | 5 |
bile duct | 4.66e-08 | 6 |
digestive system duct | 4.66e-08 | 6 |
trunk blood vessel | 7.63e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.05e-12 | 1 |
monogenic disease | 5.05e-12 | 1 |
xeroderma pigmentosum | 5.05e-12 | 1 |
clear cell adenocarcinoma | 9.44e-07 | 2 |