FFCP PHASE1:Hg19::chr15:59908762..59908770,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000560210_5end | |association_with_transcript=32bp_to_ENST00000560210_5end | ||
|cluster_id=chr15:59908762..59908770,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_18_at_GCNT3_5end | |description=CAGE_peak_18_at_GCNT3_5end | ||
|id=chr15:59908762..59908770,+ | |id=chr15:59908762..59908770,+ | ||
|ontology_enrichment_celltype=CL:0002178!1.74e-07!3;CL:0000066!5.77e-07!254;CL:0000167!7.49e-07!1;CL:0000164!7.49e-07!1;CL:0000502!7.49e-07!1;CL:0000172!7.49e-07!1;CL:0000173!7.49e-07!1;CL:0002351!7.49e-07!1 | |ontology_enrichment_celltype=CL:0002178!1.74e-07!3;CL:0000066!5.77e-07!254;CL:0000167!7.49e-07!1;CL:0000164!7.49e-07!1;CL:0000502!7.49e-07!1;CL:0000172!7.49e-07!1;CL:0000173!7.49e-07!1;CL:0002351!7.49e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;6.62e-41;1!CL:0000164;6.62e-41;1!CL:0000502;6.62e-41;1!CL:0000172;6.62e-41;1!CL:0000173;6.62e-41;1!CL:0002231;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,6.62e-41,1;CL:0000164,6.62e-41,1;CL:0000502,6.62e-41,1;CL:0000172,6.62e-41,1;CL:0000173,6.62e-41,1;CL:0002351,6.62e-41,1;CL:0002231,1.60e-14,3 | |||
|ontology_enrichment_development_v019=CL:0002351;6.62e-41;1 | |||
|ontology_enrichment_disease=DOID:305!1.57e-07!106;DOID:4430!7.49e-07!1 | |ontology_enrichment_disease=DOID:305!1.57e-07!106;DOID:4430!7.49e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:4430;6.62e-41;1!DOID:169;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.62e-41,1;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.53e-11!2;UBERON:0004921!9.89e-09!129;UBERON:0004185!9.89e-09!129;UBERON:0004119!1.72e-07!169;UBERON:0000925!1.72e-07!169;UBERON:0006595!1.72e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.69e-21;2!UBERON:0000974;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,6.96e-21,2 | |||
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|short_description=p18@GCNT3 | |short_description=p18@GCNT3 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p18@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 32bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 6.62e-41 | 1 |
enteroendocrine cell | 6.62e-41 | 1 |
type D enteroendocrine cell | 6.62e-41 | 1 |
somatostatin secreting cell | 6.62e-41 | 1 |
pancreatic D cell | 6.62e-41 | 1 |
progenitor cell of endocrine pancreas | 6.62e-41 | 1 |
epithelial cell of prostate | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.62e-41 | 1 |
neuroendocrine tumor | 5.54e-08 | 6 |