FFCP PHASE1:Hg19::chr15:77713095..77713113,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10363 | |EntrezGene=10363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5001 | |HGNC=5001 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=31bp_to_ENST00000558651_5end | |association_with_transcript=31bp_to_ENST00000558651_5end | ||
|cluster_id=chr15:77713095..77713113,+ | |||
|description=CAGE_peak_5_at_HMG20A_5end | |description=CAGE_peak_5_at_HMG20A_5end | ||
|id=chr15:77713095..77713113,+ | |id=chr15:77713095..77713113,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.55e-08!53;CL:0000051!2.55e-08!53;CL:0000838!6.38e-08!52 | |ontology_enrichment_celltype=CL:0000542!2.55e-08!53;CL:0000051!2.55e-08!53;CL:0000838!6.38e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.20e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.28e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,1.66e-07,2 | |||
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| ||
|short_description=p5@HMG20A | |short_description=p5@HMG20A | ||
}} | }} |
Latest revision as of 05:26, 19 September 2015
Short description: | p5@HMG20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HMG20A_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000558651_5end |
EntrezGene: | HMG20A |
HGNC: | 5001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.28e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 1.66e-07 | 2 |