FFCP PHASE1:Hg19::chr1:247692872..247692880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:247692872..247692880,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr1:247692872..247692880,+ | |description=CAGE_peak_at_chr1:247692872..247692880,+ | ||
|id=chr1:247692872..247692880,+ | |id=chr1:247692872..247692880,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.43e-16!254;CL:0002076!1.59e-13!43;CL:0000223!2.77e-13!59;CL:0002251!4.00e-12!21;CL:0000076!5.92e-09!62;CL:0002178!2.70e-08!3;CL:1001319!5.06e-07!1;CL:1000600!5.06e-07!1 | |ontology_enrichment_celltype=CL:0000066!1.43e-16!254;CL:0002076!1.59e-13!43;CL:0000223!2.77e-13!59;CL:0002251!4.00e-12!21;CL:0000076!5.92e-09!62;CL:0002178!2.70e-08!3;CL:1001319!5.06e-07!1;CL:1000600!5.06e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.40e-14;3!UBERON:0003353;1.40e-14;3!CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:305!6.76e-28!106;DOID:1749!6.74e-25!14;DOID:0050687!2.59e-19!143;DOID:162!6.24e-13!235;DOID:7!1.40e-12!39;DOID:14566!1.52e-12!239;DOID:299!5.17e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.24e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.24e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.07e-22!4;UBERON:0004785!1.07e-22!4;UBERON:0003729!3.35e-18!5;UBERON:0002394!1.43e-13!4;UBERON:0003928!1.43e-13!4;UBERON:0002294!1.77e-13!7;UBERON:0001173!1.77e-13!7;UBERON:0004912!1.77e-13!7;UBERON:0004119!1.92e-12!169;UBERON:0000925!1.92e-12!169;UBERON:0006595!1.92e-12!169;UBERON:0000344!1.46e-11!12;UBERON:0001007!2.83e-11!155;UBERON:0001555!2.83e-11!155;UBERON:0007026!2.83e-11!155;UBERON:0000974!3.60e-09!10;UBERON:0005911!6.37e-09!82;UBERON:0001282!4.78e-07!1;UBERON:0009842!4.78e-07!1;UBERON:0003704!4.78e-07!1;UBERON:0001171!4.78e-07!1;UBERON:0001172!4.78e-07!1;UBERON:0004645!5.06e-07!1;UBERON:0001256!5.06e-07!1;UBERON:0001259!5.06e-07!1;UBERON:0000161!5.25e-07!35;UBERON:0004913!6.76e-07!1;UBERON:0003703!6.76e-07!1;UBERON:0001174!6.76e-07!1;UBERON:0004914!6.76e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;3.42e-11;4!UBERON:0003928;3.42e-11;4!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,6.34e-08,6;UBERON:0003928,6.34e-08,6 | |||
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|short_description=p@chr1:247692872..247692880,+ | |short_description=p@chr1:247692872..247692880,+ | ||
}} | }} |
Latest revision as of 06:13, 28 July 2015
Short description: | p@chr1:247692872..247692880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:247692872..247692880, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bile duct | 6.34e-08 | 6 |
digestive system duct | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.24e-12 | 14 |