FFCP PHASE1:Hg19::chr11:64948790..64948867,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:64948790..64948867,+
|short_description=p2@CAPN1
|description=CAGE_peak_2_at_CAPN1_5end
|association_with_transcript=-16bp_to_ENST00000530571_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=823 | |EntrezGene=823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1476 | |HGNC=1476 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLQ6 | |UniProt=E9PLQ6 | ||
|association_with_transcript=-16bp_to_ENST00000530571_5end | |||
|cluster_id=chr11:64948790..64948867,+ | |||
|description=CAGE_peak_2_at_CAPN1_5end | |||
|id=chr11:64948790..64948867,+ | |||
|ontology_enrichment_celltype=CL:0002078!4.27e-07!44;CL:0000115!5.20e-07!35;CL:0000055!7.99e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,2.53e-07,45;CL:0000115,3.04e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.77e-10!659;UBERON:0009569!1.81e-07!113;UBERON:0002049!6.82e-07!79;UBERON:0007798!6.82e-07!79;UBERON:0002100!7.77e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.74e-07,78;UBERON:0007798,2.74e-07,78;UBERON:0009569,3.33e-07,112;UBERON:0003914,7.14e-07,117;UBERON:0000025,8.14e-07,192;UBERON:0006555,8.27e-07,16;UBERON:0004819,8.27e-07,16 | |||
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| ||
|short_description=p2@CAPN1 | |||
}} | }} |
Latest revision as of 06:44, 19 September 2015
Short description: | p2@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000530571_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | E9PLQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 2.53e-07 | 45 |
endothelial cell | 3.04e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.74e-07 | 78 |
vascular system | 2.74e-07 | 78 |
subdivision of trunk | 3.33e-07 | 112 |
epithelial tube | 7.14e-07 | 117 |
tube | 8.14e-07 | 192 |
excretory tube | 8.27e-07 | 16 |
kidney epithelium | 8.27e-07 | 16 |