FFCP PHASE1:Hg19::chr20:23666469..23666501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_CU688087_5end | |association_with_transcript=-30bp_to_CU688087_5end | ||
|cluster_id=chr20:23666469..23666501,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_1_at_CU688087_5end | |description=CAGE_peak_1_at_CU688087_5end | ||
|id=chr20:23666469..23666501,+ | |id=chr20:23666469..23666501,+ | ||
|ontology_enrichment_celltype=CL:0002253!1.57e-09!2 | |ontology_enrichment_celltype=CL:0002253!1.57e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002595;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006298;9.91e-41;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001736!3.16e-18!1;UBERON:0006298!3.16e-18!1;UBERON:0002134!6.23e-18!1;UBERON:0005208!6.23e-18!1;UBERON:0005946!6.23e-18!1;UBERON:0005965!6.23e-18!1;UBERON:0002078!6.23e-18!1;UBERON:0002372!1.22e-17!1;UBERON:0001961!1.22e-17!1;UBERON:0001744!1.22e-17!1;UBERON:0001735!1.22e-17!1;UBERON:0001044!2.91e-12!6;UBERON:0003293!2.91e-12!6;UBERON:0003294!2.91e-12!6;UBERON:0010047!2.91e-12!6;UBERON:0000167!2.91e-12!6;UBERON:0001829!8.69e-10!2;UBERON:0002081!1.22e-09!2;UBERON:0002133!1.22e-09!2;UBERON:0000078!5.53e-09!18;UBERON:0002365!6.08e-09!31;UBERON:0002330!6.08e-09!31;UBERON:0000166!8.87e-08!21;UBERON:0003408!1.02e-07!10;UBERON:0003978!7.70e-07!3;UBERON:0009751!7.70e-07!3;UBERON:0004151!7.70e-07!3;UBERON:0000946!7.70e-07!3;UBERON:0002523!7.70e-07!3;UBERON:0005983!7.70e-07!3;UBERON:0004145!7.70e-07!3;UBERON:0002165!7.70e-07!3;UBERON:0002062!7.70e-07!3;UBERON:0007280!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;9.91e-41;1!UBERON:0001044;1.82e-27;6!UBERON:0003293;1.82e-27;6!UBERON:0003294;1.82e-27;6!UBERON:0010047;1.82e-27;6!UBERON:0003408;1.82e-27;6!UBERON:0000167;1.82e-27;6!UBERON:0001829;3.81e-21;2!UBERON:0001041;2.00e-12;14!UBERON:0002365;4.20e-12;31!UBERON:0002330;4.20e-12;31!UBERON:0000161;1.99e-09;19!UBERON:0000166;1.99e-09;19!UBERON:0003834;3.35e-09;5!UBERON:0001533;3.35e-09;5!UBERON:0003513;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,9.91e-41,1;UBERON:0006298,9.91e-41,1;UBERON:0001044,1.82e-27,6;UBERON:0003293,1.82e-27,6;UBERON:0003294,1.82e-27,6;UBERON:0010047,1.82e-27,6;UBERON:0000167,1.82e-27,6;UBERON:0001829,3.81e-21,2;UBERON:0003408,5.90e-17,10;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0003834,3.22e-09,5;UBERON:0001533,3.22e-09,5;UBERON:0000166,2.82e-08,22;UBERON:0003513,6.04e-07,7;UBERON:0002530,7.38e-07,59 | |||
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|short_description=p1@CU688087 | |short_description=p1@CU688087 | ||
}} | }} |
Latest revision as of 12:34, 28 July 2015
Short description: | p1@CU688087 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU688087_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -30bp_to_CU688087_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 9.91e-41 | 1 |
submandibular gland primordium | 9.91e-41 | 1 |
saliva-secreting gland | 1.82e-27 | 6 |
gland of oral region | 1.82e-27 | 6 |
gland of foregut | 1.82e-27 | 6 |
oral gland | 1.82e-27 | 6 |
oral cavity | 1.82e-27 | 6 |
major salivary gland | 3.81e-21 | 2 |
gland of gut | 5.90e-17 | 10 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
thoracic segment blood vessel | 3.22e-09 | 5 |
subclavian artery | 3.22e-09 | 5 |
oral opening | 2.82e-08 | 22 |
trunk blood vessel | 6.04e-07 | 7 |
gland | 7.38e-07 | 59 |