FFCP PHASE1:Hg19::chr16:85623127..85623139,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85623127..85623139,+ | |||
|description=CAGE_peak_at_chr16:85623127..85623139,+ | |description=CAGE_peak_at_chr16:85623127..85623139,+ | ||
|id=chr16:85623127..85623139,+ | |id=chr16:85623127..85623139,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.68e-13!182;CL:0000037!3.00e-13!172;CL:0000566!3.00e-13!172;CL:0002032!7.74e-13!165;CL:0000837!7.74e-13!165;CL:0000860!4.69e-11!45;CL:0002087!9.04e-11!119;CL:0002057!5.25e-10!42;CL:0000763!5.51e-10!112;CL:0000049!5.51e-10!112;CL:0002031!1.22e-09!124;CL:0000738!2.23e-09!140;CL:0000839!6.07e-08!70;CL:0000766!2.85e-07!76;CL:0002194!4.16e-07!63;CL:0000576!4.16e-07!63;CL:0000040!4.16e-07!63;CL:0000559!4.16e-07!63;CL:0000557!5.27e-07!71 | |ontology_enrichment_celltype=CL:0000988!2.68e-13!182;CL:0000037!3.00e-13!172;CL:0000566!3.00e-13!172;CL:0002032!7.74e-13!165;CL:0000837!7.74e-13!165;CL:0000860!4.69e-11!45;CL:0002087!9.04e-11!119;CL:0002057!5.25e-10!42;CL:0000763!5.51e-10!112;CL:0000049!5.51e-10!112;CL:0002031!1.22e-09!124;CL:0000738!2.23e-09!140;CL:0000839!6.07e-08!70;CL:0000766!2.85e-07!76;CL:0002194!4.16e-07!63;CL:0000576!4.16e-07!63;CL:0000040!4.16e-07!63;CL:0000559!4.16e-07!63;CL:0000557!5.27e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000623;8.50e-24;3!CL:0000542;3.74e-07;53!CL:0000625;7.20e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.09e-24,3;CL:0000825,3.09e-24,3;CL:0000838,1.17e-10,52;CL:0002087,1.66e-10,115;CL:0000542,1.97e-10,53;CL:0000051,1.97e-10,53;CL:0000738,5.70e-10,136;CL:0002031,5.75e-10,120;CL:0002032,2.91e-09,161;CL:0000837,2.91e-09,161;CL:0000037,9.33e-09,168;CL:0000988,3.65e-08,177;CL:0000625,6.78e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;3.74e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!7.09e-07!39 | |ontology_enrichment_disease=DOID:1240!7.09e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.97e-09;1!DOID:10165;5.97e-09;1!DOID:1798;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.49e-09,1;DOID:10165,8.49e-09,1;DOID:1798,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.42e-07!102;UBERON:0003061!1.42e-07!102;UBERON:0007023!9.98e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0.553995408531877,4.01088894940283,1.95309783644267,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,1.52909291250092,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.130059347559878,0.822189523018381,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.20964045934839,2.13952156626806,1.88271725047639,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0.414656231081544,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,1.37921532141349,1.94064817373566,2.82354679815446,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.620304078368662,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0.159426272728822,0.59873811429845,0,0.423347165447766,0,0.561594356226918,0.912938716132769,0.156679895773023,0,0,0.642352300414798,0.605399121573143,0,0,0.307240764308458,0,0.834245708559542,0.19538809540204,0.556812347790485,0,0.270455678475983,0.66614393599564,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0.398495976502139,0.276283915531148,1.0077309914171,0,0.369254416383208,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0.23056390438806,0.448788222048861,0.434589487688032,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.569261198172555,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.123563938946503,0.417687798021821,0.202203398942031,0.802577647298789,0,0.364909578431332,0,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,2.05913997434357,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0.199679000498991,0.858452096273142,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.39669780522807,0,0,0.213574825135389,0.471612915298998,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0,0.438568099157414,0,0,0.337884881306145,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0.327628914576042,0.169732529954025,0.637724760305049,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,1.04762677792569,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0.127762427639595,0,0.336283722218824,0,1.36597314810779,0.354809480650555,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0.596852325484105,0,0,0.659643100472575,0,0,0.874238242015829,0.940634592723046,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.135982980381829,0,1.5870805215462,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0.250707539292375,0.151557396436479,2.14371304124943,0,0.20686599172379,0.213233981900981,0,0,0.31037357147929,0,0.0636471582781649,0.606351566874658,0.435433495793923,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0.284338464974843,0,0.553995408531877,4.01088894940283,1.95309783644267,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,1.52909291250092,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0.130059347559878,0.822189523018381,0,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,1.20964045934839,2.13952156626806,1.88271725047639,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0.504867548488229,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0.414656231081544,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,1.37921532141349,1.94064817373566,2.82354679815446,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.620304078368662,0.862856803274467,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0.159426272728822,0.59873811429845,0,0.423347165447766,0,0.561594356226918,0.912938716132769,0.156679895773023,0,0,0.642352300414798,0.605399121573143,0,0,0.307240764308458,0,0.834245708559542,0.19538809540204,0.556812347790485,0,0.270455678475983,0.66614393599564,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0.211125408127993,0.398495976502139,0.276283915531148,1.0077309914171,0,0.369254416383208,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,0,0.291604613383254,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0.23056390438806,0.448788222048861,0.434589487688032,0,0,0,1.02193298195737,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0.569261198172555,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.123563938946503,0.417687798021821,0.202203398942031,0.802577647298789,0,0.364909578431332,0,0,0.394584402849391,0,0.61214552326098,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,2.05913997434357,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0.687481272035051,0,0.199679000498991,0.858452096273142,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0.113312091520126,0,0,0,0.39669780522807,0,0,0.213574825135389,0.471612915298998,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0.179088841081487,0,0.438568099157414,0,0,0.337884881306145,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0.327628914576042,0.169732529954025,0.637724760305049,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,1.04762677792569,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0.127762427639595,0,0.336283722218824,0,1.36597314810779,0.354809480650555,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,1.29068207646083,0,0.0852134047591577,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0.596852325484105,0,0,0.659643100472575,0,0,0.874238242015829,0.940634592723046,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0.299823467774787,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.135982980381829,0,1.5870805215462,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0.250707539292375,0.151557396436479,2.14371304124943,0,0.20686599172379,0.213233981900981,0,0,0.31037357147929,0,0.0636471582781649,0.606351566874658,0.435433495793923,0,0.134704106029175,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0 | ||
|short_description=p@chr16:85623127..85623139,+ | |short_description=p@chr16:85623127..85623139,+ | ||
}} | }} |
Latest revision as of 13:01, 25 July 2015
Short description: | p@chr16:85623127..85623139, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85623127..85623139, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.09e-24 | 3 |
pro-NK cell | 3.09e-24 | 3 |
lymphoid lineage restricted progenitor cell | 1.17e-10 | 52 |
nongranular leukocyte | 1.66e-10 | 115 |
lymphocyte | 1.97e-10 | 53 |
common lymphoid progenitor | 1.97e-10 | 53 |
leukocyte | 5.70e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 5.75e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.91e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-09 | 161 |
hematopoietic stem cell | 9.33e-09 | 168 |
hematopoietic cell | 3.65e-08 | 177 |
CD8-positive, alpha-beta T cell | 6.78e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.49e-09 | 1 |
endocrine pancreas cancer | 8.49e-09 | 1 |
pancreatic endocrine carcinoma | 8.49e-09 | 1 |