FFCP PHASE1:Hg19::chr16:89688655..89688668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:89688655..89688668,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_at_chr16:89688655..89688668,+ | |description=CAGE_peak_at_chr16:89688655..89688668,+ | ||
|id=chr16:89688655..89688668,+ | |id=chr16:89688655..89688668,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.68e-16!4;CL:0000181!2.65e-12!12;CL:0000417!2.65e-12!12;CL:0000668!2.65e-12!12;CL:0000414!2.65e-12!12;CL:0000412!2.65e-12!12;CL:0000182!2.65e-12!12;CL:0002535!3.43e-09!2;CL:0002253!7.49e-09!2 | |ontology_enrichment_celltype=CL:0002563!5.68e-16!4;CL:0000181!2.65e-12!12;CL:0000417!2.65e-12!12;CL:0000668!2.65e-12!12;CL:0000414!2.65e-12!12;CL:0000412!2.65e-12!12;CL:0000182!2.65e-12!12;CL:0002535!3.43e-09!2;CL:0002253!7.49e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.74e-50;2!CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-50,2;CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;4.21e-21;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.21e-21,5 | |||
|ontology_enrichment_uberon=UBERON:0001896!3.63e-21!3;UBERON:0005290!3.63e-21!3;UBERON:0010096!3.63e-21!3;UBERON:0001242!5.68e-16!4;UBERON:0001262!5.68e-16!4;UBERON:0004786!5.68e-16!4;UBERON:0004808!5.68e-16!4;UBERON:0001277!5.68e-16!4;UBERON:0003350!5.60e-13!5;UBERON:0006955!3.43e-09!2;UBERON:0004801!3.43e-09!2;UBERON:0002298!1.53e-08!8;UBERON:0002107!5.61e-08!19;UBERON:0006925!5.61e-08!19;UBERON:0008836!5.61e-08!19;UBERON:0000485!1.29e-07!9;UBERON:0003929!4.14e-07!54;UBERON:0005172!5.10e-07!55;UBERON:0005173!5.10e-07!55;UBERON:0008835!5.85e-07!22;UBERON:0003894!5.85e-07!22 | |ontology_enrichment_uberon=UBERON:0001896!3.63e-21!3;UBERON:0005290!3.63e-21!3;UBERON:0010096!3.63e-21!3;UBERON:0001242!5.68e-16!4;UBERON:0001262!5.68e-16!4;UBERON:0004786!5.68e-16!4;UBERON:0004808!5.68e-16!4;UBERON:0001277!5.68e-16!4;UBERON:0003350!5.60e-13!5;UBERON:0006955!3.43e-09!2;UBERON:0004801!3.43e-09!2;UBERON:0002298!1.53e-08!8;UBERON:0002107!5.61e-08!19;UBERON:0006925!5.61e-08!19;UBERON:0008836!5.61e-08!19;UBERON:0000485!1.29e-07!9;UBERON:0003929!4.14e-07!54;UBERON:0005172!5.10e-07!55;UBERON:0005173!5.10e-07!55;UBERON:0008835!5.85e-07!22;UBERON:0003894!5.85e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.74e-50;2!UBERON:0004801;2.74e-50;2!UBERON:0000002;7.67e-18;6!UBERON:0001560;7.67e-18;6!UBERON:0000995;3.38e-07;17!UBERON:0003975;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.74e-50,2;UBERON:0004801,2.74e-50,2;UBERON:0000002,7.67e-18,6;UBERON:0001560,7.67e-18,6 | |||
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|short_description=p@chr16:89688655..89688668,+ | |short_description=p@chr16:89688655..89688668,+ | ||
}} | }} |
Latest revision as of 13:29, 25 July 2015
Short description: | p@chr16:89688655..89688668, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:89688655..89688668, + |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-50 | 2 |
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.74e-50 | 2 |
cervix epithelium | 2.74e-50 | 2 |
uterine cervix | 7.67e-18 | 6 |
neck of organ | 7.67e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.21e-21 | 5 |