FFCP PHASE1:Hg19::chr17:39659222..39659229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3860 | |EntrezGene=3860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6415 | |HGNC=6415 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-210bp_to_ENST00000464634_5end | |association_with_transcript=-210bp_to_ENST00000464634_5end | ||
|cluster_id=chr17:39659222..39659229,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_17_at_KRT13_5end | |description=CAGE_peak_17_at_KRT13_5end | ||
|id=chr17:39659222..39659229,- | |id=chr17:39659222..39659229,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.10e-41;1!UBERON:0008814;3.44e-21;2!UBERON:0010056;3.44e-21;2 | |||
|ontology_enrichment_disease=DOID:3151!1.65e-16!1;DOID:3149!1.65e-16!1;DOID:3451!6.42e-09!2;DOID:4159!6.42e-09!2;DOID:0060122!6.42e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.87e-31!2;UBERON:0001723!1.29e-21!3;UBERON:0001033!1.29e-21!3;UBERON:0010056!1.29e-21!3;UBERON:0002372!1.04e-16!1;UBERON:0001961!1.04e-16!1;UBERON:0001744!1.04e-16!1;UBERON:0001735!1.04e-16!1;UBERON:0001042!1.54e-14!10;UBERON:0009145!1.54e-14!10;UBERON:0006562!2.83e-13!11;UBERON:0000002!3.39e-11!6;UBERON:0001560!3.39e-11!6;UBERON:0003127!8.09e-09!2;UBERON:0000078!2.45e-08!18;UBERON:0001557!6.32e-08!19;UBERON:0000166!3.21e-07!21;UBERON:0000974!4.66e-07!10;UBERON:0005795!6.89e-07!22 | |ontology_enrichment_uberon=UBERON:0000341!1.87e-31!2;UBERON:0001723!1.29e-21!3;UBERON:0001033!1.29e-21!3;UBERON:0010056!1.29e-21!3;UBERON:0002372!1.04e-16!1;UBERON:0001961!1.04e-16!1;UBERON:0001744!1.04e-16!1;UBERON:0001735!1.04e-16!1;UBERON:0001042!1.54e-14!10;UBERON:0009145!1.54e-14!10;UBERON:0006562!2.83e-13!11;UBERON:0000002!3.39e-11!6;UBERON:0001560!3.39e-11!6;UBERON:0003127!8.09e-09!2;UBERON:0000078!2.45e-08!18;UBERON:0001557!6.32e-08!19;UBERON:0000166!3.21e-07!21;UBERON:0000974!4.66e-07!10;UBERON:0005795!6.89e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0005795;2.70e-40;1!UBERON:0000341;4.66e-21;2!UBERON:0001043;1.31e-14;3!UBERON:0001723;1.31e-14;3!UBERON:0001033;1.31e-14;3!UBERON:0002050;3.35e-09;5!UBERON:0005423;3.35e-09;5!UBERON:0000974;6.34e-08;6!UBERON:0000002;7.01e-08;6!UBERON:0001560;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.66e-21,2;UBERON:0001723,1.22e-14,3;UBERON:0001033,1.22e-14,3;UBERON:0010056,1.22e-14,3;UBERON:0001043,1.40e-14,3;UBERON:0009143,1.40e-14,3;UBERON:0005795,3.51e-08,22;UBERON:0000002,7.25e-08,6;UBERON:0001560,7.25e-08,6 | |||
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|short_description=p17@KRT13 | |short_description=p17@KRT13 | ||
}} | }} |
Latest revision as of 05:26, 20 September 2015
Short description: | p17@KRT13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_KRT13_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -210bp_to_ENST00000464634_5end |
EntrezGene: | KRT13 |
HGNC: | 6415 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 4.66e-21 | 2 |
tongue | 1.22e-14 | 3 |
gustatory system | 1.22e-14 | 3 |
future tongue | 1.22e-14 | 3 |
esophagus | 1.40e-14 | 3 |
esophageal region | 1.40e-14 | 3 |
embryonic uterus | 3.51e-08 | 22 |
uterine cervix | 7.25e-08 | 6 |
neck of organ | 7.25e-08 | 6 |