FFCP PHASE1:Hg19::chr17:995247..995256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29 | |EntrezGene=29 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=81 | |HGNC=81 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZT60 | |UniProt=Q6ZT60 | ||
|association_with_transcript=-147bp_to_uc002fsh.1_5end | |association_with_transcript=-147bp_to_uc002fsh.1_5end | ||
|cluster_id=chr17:995247..995256,- | |||
|coexpression_cluster_id=C2451 | |||
|description=CAGE_peak_45_at_ABR_5end | |description=CAGE_peak_45_at_ABR_5end | ||
|id=chr17:995247..995256,- | |id=chr17:995247..995256,- | ||
|ontology_enrichment_celltype=CL:0002623!6.46e-10!3;CL:0000840!1.09e-09!5;CL:0001029!1.09e-09!5 | |ontology_enrichment_celltype=CL:0002623!6.46e-10!3;CL:0000840!1.09e-09!5;CL:0001029!1.09e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002623;8.37e-39;3!CL:0000622;9.08e-24;5!CL:0000154;5.35e-20;6!CL:0000150;1.08e-13;9!CL:0000244;2.35e-08;4!CL:0000731;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.37e-39,3;CL:0000622,9.08e-24,5;CL:0000154,5.35e-20,6;CL:0000150,1.08e-13,9;CL:0000244,2.26e-08,4;CL:0000731,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.98e-30;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p45@ABR | |short_description=p45@ABR | ||
}} | }} |
Latest revision as of 17:42, 18 September 2015
Short description: | p45@ABR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_45_at_ABR_5end |
Coexpression cluster: | C2451_salivary_esophagus_tonsil_tongue_trachea_throat_cervix |
Association with transcript: | -147bp_to_uc002fsh.1_5end |
EntrezGene: | ABR |
HGNC: | 81 |
UniProt: | Q6ZT60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.37e-39 | 3 |
acinar cell | 9.08e-24 | 5 |
protein secreting cell | 5.35e-20 | 6 |
glandular epithelial cell | 1.08e-13 | 9 |
transitional epithelial cell | 2.26e-08 | 4 |
urothelial cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
saliva-secreting gland | 5.35e-20 | 6 |
gland of oral region | 5.35e-20 | 6 |
gland of foregut | 5.35e-20 | 6 |
oral gland | 5.35e-20 | 6 |
oral cavity | 5.35e-20 | 6 |
open tracheal system trachea | 2.37e-15 | 2 |
throat | 2.74e-15 | 2 |
gland of gut | 2.00e-12 | 10 |
oral opening | 2.26e-12 | 22 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
mouth | 1.48e-09 | 29 |
stomodeum | 1.48e-09 | 29 |
foregut | 1.72e-08 | 87 |
orifice | 7.96e-08 | 36 |
anterior region of body | 8.45e-08 | 62 |
craniocervical region | 8.45e-08 | 62 |
urothelium | 6.04e-07 | 5 |