FFCP PHASE1:Hg19::chr18:12254353..12254366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1149 | |EntrezGene=1149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1976 | |HGNC=1976 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJ03 | |UniProt=E5RJ03 | ||
|association_with_transcript=0bp_to_ENST00000522713,NR_036468_5end | |association_with_transcript=0bp_to_ENST00000522713,NR_036468_5end | ||
|cluster_id=chr18:12254353..12254366,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_CIDEA_5end | |description=CAGE_peak_1_at_CIDEA_5end | ||
|id=chr18:12254353..12254366,+ | |id=chr18:12254353..12254366,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002681;1.83e-10;12!CL:0002584;1.83e-10;12!CL:0002618;2.43e-08;3!CL:1000449;3.71e-08;15!CL:0000115;1.72e-07;36!CL:0002543;2.05e-07;6!CL:0002139;2.31e-07;24!CL:0002078;3.95e-07;45!CL:1000497;4.49e-07;17!CL:0002518;4.49e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002681,1.76e-10,12;CL:0002584,1.76e-10,12;CL:0002078,4.54e-10,45;CL:0000115,8.00e-10,36;CL:0002618,2.02e-08,3;CL:1000449,3.59e-08,15;CL:0002139,1.72e-07,24;CL:0002543,1.82e-07,6;CL:1000497,4.37e-07,17;CL:0002518,4.37e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006965;5.45e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-26!115;UBERON:0000119!1.52e-16!312;UBERON:0003056!1.64e-16!61;UBERON:0001869!3.13e-16!32;UBERON:0001893!5.24e-16!34;UBERON:0002020!8.19e-16!34;UBERON:0003528!8.19e-16!34;UBERON:0000483!3.17e-15!309;UBERON:0002791!3.67e-15!33;UBERON:0004111!1.64e-14!241;UBERON:0000064!1.66e-14!219;UBERON:0000477!2.96e-14!286;UBERON:0003075!5.46e-14!86;UBERON:0007284!5.46e-14!86;UBERON:0000956!5.55e-14!25;UBERON:0000203!5.55e-14!25;UBERON:0001950!5.84e-14!20;UBERON:0002619!1.28e-13!22;UBERON:0002346!1.51e-13!90;UBERON:0000481!1.82e-13!347;UBERON:0000153!2.61e-13!129;UBERON:0007811!2.61e-13!129;UBERON:0000033!3.55e-13!123;UBERON:0003080!6.57e-13!42;UBERON:0002780!5.51e-12!41;UBERON:0001890!5.51e-12!41;UBERON:0006240!5.51e-12!41;UBERON:0000475!7.90e-12!365;UBERON:0000025!9.25e-12!194;UBERON:0001049!2.26e-11!57;UBERON:0005068!2.26e-11!57;UBERON:0006241!2.26e-11!57;UBERON:0007135!2.26e-11!57;UBERON:0002616!1.57e-10!59;UBERON:0004121!2.50e-09!169;UBERON:0000924!3.21e-09!173;UBERON:0006601!3.21e-09!173;UBERON:0000468!3.57e-09!659;UBERON:0003103!3.61e-09!69;UBERON:0000955!3.93e-09!69;UBERON:0006238!3.93e-09!69;UBERON:0000467!6.29e-09!625;UBERON:0000480!7.53e-09!626;UBERON:0000922!9.41e-09!612;UBERON:0000923!1.75e-08!604;UBERON:0005291!1.75e-08!604;UBERON:0006598!1.75e-08!604;UBERON:0002532!1.75e-08!604;UBERON:0002050!2.08e-08!605;UBERON:0005423!2.08e-08!605;UBERON:0005743!3.31e-08!86;UBERON:0004876!6.72e-08!20;UBERON:0000073!8.96e-08!94;UBERON:0001016!8.96e-08!94;UBERON:0000080!1.64e-07!18;UBERON:0002120!1.64e-07!18;UBERON:0004875!1.64e-07!18;UBERON:0005721!1.64e-07!18;UBERON:0005754!1.64e-07!18;UBERON:0007297!1.64e-07!18;UBERON:0001017!4.85e-07!82;UBERON:0000062!6.24e-07!511;UBERON:0006555!9.69e-07!17;UBERON:0005103!9.69e-07!17;UBERON:0000083!9.69e-07!17;UBERON:0009201!9.69e-07!17;UBERON:0004819!9.69e-07!17;UBERON:0006553!9.69e-07!17;UBERON:0003074!9.69e-07!17;UBERON:0003060!9.69e-07!17 | |ontology_enrichment_uberon=UBERON:0007023!2.34e-26!115;UBERON:0000119!1.52e-16!312;UBERON:0003056!1.64e-16!61;UBERON:0001869!3.13e-16!32;UBERON:0001893!5.24e-16!34;UBERON:0002020!8.19e-16!34;UBERON:0003528!8.19e-16!34;UBERON:0000483!3.17e-15!309;UBERON:0002791!3.67e-15!33;UBERON:0004111!1.64e-14!241;UBERON:0000064!1.66e-14!219;UBERON:0000477!2.96e-14!286;UBERON:0003075!5.46e-14!86;UBERON:0007284!5.46e-14!86;UBERON:0000956!5.55e-14!25;UBERON:0000203!5.55e-14!25;UBERON:0001950!5.84e-14!20;UBERON:0002619!1.28e-13!22;UBERON:0002346!1.51e-13!90;UBERON:0000481!1.82e-13!347;UBERON:0000153!2.61e-13!129;UBERON:0007811!2.61e-13!129;UBERON:0000033!3.55e-13!123;UBERON:0003080!6.57e-13!42;UBERON:0002780!5.51e-12!41;UBERON:0001890!5.51e-12!41;UBERON:0006240!5.51e-12!41;UBERON:0000475!7.90e-12!365;UBERON:0000025!9.25e-12!194;UBERON:0001049!2.26e-11!57;UBERON:0005068!2.26e-11!57;UBERON:0006241!2.26e-11!57;UBERON:0007135!2.26e-11!57;UBERON:0002616!1.57e-10!59;UBERON:0004121!2.50e-09!169;UBERON:0000924!3.21e-09!173;UBERON:0006601!3.21e-09!173;UBERON:0000468!3.57e-09!659;UBERON:0003103!3.61e-09!69;UBERON:0000955!3.93e-09!69;UBERON:0006238!3.93e-09!69;UBERON:0000467!6.29e-09!625;UBERON:0000480!7.53e-09!626;UBERON:0000922!9.41e-09!612;UBERON:0000923!1.75e-08!604;UBERON:0005291!1.75e-08!604;UBERON:0006598!1.75e-08!604;UBERON:0002532!1.75e-08!604;UBERON:0002050!2.08e-08!605;UBERON:0005423!2.08e-08!605;UBERON:0005743!3.31e-08!86;UBERON:0004876!6.72e-08!20;UBERON:0000073!8.96e-08!94;UBERON:0001016!8.96e-08!94;UBERON:0000080!1.64e-07!18;UBERON:0002120!1.64e-07!18;UBERON:0004875!1.64e-07!18;UBERON:0005721!1.64e-07!18;UBERON:0005754!1.64e-07!18;UBERON:0007297!1.64e-07!18;UBERON:0001017!4.85e-07!82;UBERON:0000062!6.24e-07!511;UBERON:0006555!9.69e-07!17;UBERON:0005103!9.69e-07!17;UBERON:0000083!9.69e-07!17;UBERON:0009201!9.69e-07!17;UBERON:0004819!9.69e-07!17;UBERON:0006553!9.69e-07!17;UBERON:0003074!9.69e-07!17;UBERON:0003060!9.69e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.71e-10;15!UBERON:0001225;1.83e-10;12!UBERON:0008987;1.83e-10;12!UBERON:0001872;1.82e-08;5!UBERON:0001851;3.71e-08;15!UBERON:0006555;3.71e-08;15!UBERON:0004819;3.71e-08;15!UBERON:0001285;3.71e-08;15!UBERON:0007684;3.71e-08;15!UBERON:0001638;1.41e-07;9!UBERON:0003920;1.41e-07;9!UBERON:0004582;1.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.00e-11,114;UBERON:0000353,1.48e-10,15;UBERON:0001225,1.76e-10,12;UBERON:0008987,1.76e-10,12;UBERON:0001872,3.38e-08,5;UBERON:0001851,3.59e-08,15;UBERON:0004211,3.59e-08,15;UBERON:0009773,3.59e-08,15;UBERON:0001231,3.59e-08,15;UBERON:0001285,3.59e-08,15;UBERON:0007684,3.59e-08,15;UBERON:0004208,3.59e-08,15;UBERON:0003103,1.05e-07,68;UBERON:0001638,1.27e-07,9;UBERON:0003920,1.27e-07,9;UBERON:0004582,1.27e-07,9;UBERON:0006555,1.36e-07,16;UBERON:0004819,1.36e-07,16 | |||
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| ||
|short_description=p1@CIDEA | |short_description=p1@CIDEA | ||
}} | }} |
Latest revision as of 19:38, 18 September 2015
Short description: | p1@CIDEA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CIDEA_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 0bp_to_ENST00000522713, NR_036468_5end |
EntrezGene: | CIDEA |
HGNC: | 1976 |
UniProt: | E5RJ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.76e-10 | 12 |
renal cortical epithelial cell | 1.76e-10 | 12 |
meso-epithelial cell | 4.54e-10 | 45 |
endothelial cell | 8.00e-10 | 36 |
endothelial cell of umbilical vein | 2.02e-08 | 3 |
epithelial cell of nephron | 3.59e-08 | 15 |
endothelial cell of vascular tree | 1.72e-07 | 24 |
vein endothelial cell | 1.82e-07 | 6 |
kidney cell | 4.37e-07 | 17 |
kidney epithelial cell | 4.37e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.00e-11 | 114 |
parenchyma | 1.48e-10 | 15 |
cortex of kidney | 1.76e-10 | 12 |
renal parenchyma | 1.76e-10 | 12 |
parietal lobe | 3.38e-08 | 5 |
cortex | 3.59e-08 | 15 |
nephron epithelium | 3.59e-08 | 15 |
renal tubule | 3.59e-08 | 15 |
nephron tubule | 3.59e-08 | 15 |
nephron | 3.59e-08 | 15 |
uriniferous tubule | 3.59e-08 | 15 |
nephrogenic mesenchyme | 3.59e-08 | 15 |
compound organ | 1.05e-07 | 68 |
vein | 1.27e-07 | 9 |
venous blood vessel | 1.27e-07 | 9 |
venous system | 1.27e-07 | 9 |
excretory tube | 1.36e-07 | 16 |
kidney epithelium | 1.36e-07 | 16 |