FFCP PHASE1:Hg19::chr18:33613722..33613735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:33613722..33613735,- | |||
|description=CAGE_peak_at_chr18:33613722..33613735,- | |description=CAGE_peak_at_chr18:33613722..33613735,- | ||
|id=chr18:33613722..33613735,- | |id=chr18:33613722..33613735,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000785;1.96e-12;1!CL:0000819;1.96e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,3.45e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.96e-12;1!CL:0000954;7.60e-07;2!UBERON:0010122;7.60e-07;2 | |||
|ontology_enrichment_disease=DOID:162!1.06e-09!235;DOID:14566!1.22e-09!239;DOID:0050687!1.26e-07!143 | |ontology_enrichment_disease=DOID:162!1.06e-09!235;DOID:14566!1.22e-09!239;DOID:0050687!1.26e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:0060073;1.96e-12;1!DOID:8675;1.96e-12;1!DOID:2513;1.96e-12;1!DOID:3451;7.60e-07;2!DOID:4159;7.60e-07;2!DOID:0060122;7.60e-07;2!DOID:4468;7.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.96e-12,1;DOID:0060073,3.45e-12,1;DOID:8675,3.45e-12,1;DOID:4468,6.80e-07,2;DOID:3451,7.61e-07,2;DOID:4159,7.61e-07,2;DOID:0060122,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.54e-09!41;UBERON:0001890!2.54e-09!41;UBERON:0006240!2.54e-09!41;UBERON:0003080!8.08e-09!42;UBERON:0001049!4.16e-08!57;UBERON:0005068!4.16e-08!57;UBERON:0006241!4.16e-08!57;UBERON:0007135!4.16e-08!57;UBERON:0001893!6.38e-08!34;UBERON:0002791!1.13e-07!33;UBERON:0002020!1.70e-07!34;UBERON:0003528!1.70e-07!34;UBERON:0001017!2.55e-07!82;UBERON:0001869!2.81e-07!32;UBERON:0000073!8.34e-07!94;UBERON:0001016!8.34e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.96e-12;1!UBERON:0001567;1.96e-12;1!UBERON:0002771;4.55e-07;2!UBERON:0001873;7.60e-07;2!UBERON:0006562;7.60e-07;2!UBERON:0001829;7.60e-07;2!UBERON:0004089;7.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.08e-12,1;UBERON:0001567,3.08e-12,1;UBERON:0008801,3.08e-12,1;UBERON:0002771,4.56e-07,2;UBERON:0001873,4.83e-07,2;UBERON:0010122,4.83e-07,2;UBERON:0001829,9.54e-07,2;UBERON:0004089,9.54e-07,2 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0.572471974262113,0.547497700291537,0.376627918784408,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0.154816123316076,0,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,0,0,0.217010870715852,0.447830948479849,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0.290209238628584,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0.434539556882471,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0.298897361103602,0.23486899728753,0.323745888736263,0,0,0,0,0,0.247266929278557,0,0,0,0.625592599359821,0,0,0.30648779579902,0,0,0.179389635688862,0,0.423863802319124,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.853815942907168,0.795178609928912,0.464775771478074,0.932949495138334,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0,0.539325232640658,0,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.603173834469785,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0,0.16798212819886,0,0.626909658919938,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,0,1.3996218765488,0,0,0,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.179060963239896,0.112085143993527,0,0.431255149719035,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.892144943985809,0.315404830067869,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,1.03850885836724,0.116210378459959,0.241718899183244,0.40101294060657,0.828728900423067,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0.384380134730212,0,0.30347334256665,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,1.39705560002972,0,0.423347165447766,0,0.561594356226918,0,0.94007937463814,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.36408156524854,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0.994147647766298,0.281338832821026,0.222617410045812,0.494411622680279,0.422250816255987,0.398495976502139,0,0.503865495708552,0.102268682502155,0.123084805461069,1.24415835064723,0.179736702294654,0.179021174675609,0,0.295930216910801,0,0,0,0.371072392647405,0,0.7812832832557,0.0874599999961957,0,0.227586896570999,0.254253650292766,0.236387681767936,0,0,0.173624994933292,1.77148277162768,0,0,0.442317039724898,1.18219047581419,0.219385397153973,0.21787692703798,0,0.153900517007594,0.113942055847001,0,0.448788222048861,0.325942115766024,0,0,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0.189753732724185,0.158936578980379,1.26598838716816,0.326465616318295,0.141353071433941,0,0,0,0,0.593042257361244,0,0,0.202203398942031,0,0.468528891450678,1.094728735294,0,0.242780379534093,0,0,0,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0.347119476670262,0.195984794828755,0.0870592065804026,0.873633341210151,0.343972064943233,0.387025325156341,0.146178634172371,0.328461828212837,0,0.176512253383001,0.225980740780532,0.274083849293502,0,0.189932387867636,0.391102765469606,0.0801588202515337,0,0.39961921916426,0,0.114536596165916,0.171594997861965,0.14405479798815,0,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| ||
|short_description=p@chr18:33613722..33613735,- | |short_description=p@chr18:33613722..33613735,- | ||
}} | }} |
Latest revision as of 00:37, 26 July 2015
Short description: | p@chr18:33613722..33613735, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:33613722..33613735, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 3.45e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.08e-12 | 1 |
cheek | 3.08e-12 | 1 |
parotid gland primordium | 3.08e-12 | 1 |
middle temporal gyrus | 4.56e-07 | 2 |
caudate nucleus | 4.83e-07 | 2 |
future caudate nucleus | 4.83e-07 | 2 |
major salivary gland | 9.54e-07 | 2 |
midface | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.96e-12 | 1 |
lymphatic system cancer | 3.45e-12 | 1 |
lymphosarcoma | 3.45e-12 | 1 |
clear cell adenocarcinoma | 6.80e-07 | 2 |
skin carcinoma | 7.61e-07 | 2 |
skin cancer | 7.61e-07 | 2 |
integumentary system cancer | 7.61e-07 | 2 |