FFCP PHASE1:Hg19::chr2:216325667..216325706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:216325667..216325706,+ | |||
|description=CAGE_peak_at_chr2:216325667..216325706,+ | |description=CAGE_peak_at_chr2:216325667..216325706,+ | ||
|id=chr2:216325667..216325706,+ | |id=chr2:216325667..216325706,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.71e-16!180;CL:0000359!3.02e-13!32;CL:0000680!3.59e-13!57;CL:0000056!3.59e-13!57;CL:0000355!3.59e-13!57;CL:0000144!3.80e-12!625;CL:0000187!6.46e-12!54;CL:0000057!6.99e-12!75;CL:0002371!8.39e-12!591;CL:0000183!1.60e-11!59;CL:0002620!1.63e-11!23;CL:0000192!2.50e-11!42;CL:0000514!2.50e-11!42;CL:0000393!4.32e-10!60;CL:0000211!4.32e-10!60;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!1.87e-09!682;CL:0000723!3.22e-09!436;CL:0000048!3.51e-09!430;CL:0000034!1.10e-08!444;CL:0000003!6.10e-08!722 | |ontology_enrichment_celltype=CL:0000055!2.71e-16!180;CL:0000359!3.02e-13!32;CL:0000680!3.59e-13!57;CL:0000056!3.59e-13!57;CL:0000355!3.59e-13!57;CL:0000144!3.80e-12!625;CL:0000187!6.46e-12!54;CL:0000057!6.99e-12!75;CL:0002371!8.39e-12!591;CL:0000183!1.60e-11!59;CL:0002620!1.63e-11!23;CL:0000192!2.50e-11!42;CL:0000514!2.50e-11!42;CL:0000393!4.32e-10!60;CL:0000211!4.32e-10!60;CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!1.87e-09!682;CL:0000723!3.22e-09!436;CL:0000048!3.51e-09!430;CL:0000034!1.10e-08!444;CL:0000003!6.10e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0002616;2.71e-19;1!CL:0002593;2.48e-10;2!CL:0002577;1.93e-07;3!CL:0002521;2.63e-07;3!CL:0000346;2.63e-07;3!CL:1000428;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,1.88e-19,1;CL:0002593,3.27e-10,2;CL:0002577,1.93e-07,3;CL:0002521,2.05e-07,3;CL:0000346,2.63e-07,3;CL:1000428,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.19e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.94e-14!42;UBERON:0003509!1.94e-14!42;UBERON:0004572!1.94e-14!42;UBERON:0000914!2.44e-14!83;UBERON:0002329!2.44e-14!83;UBERON:0003077!2.44e-14!83;UBERON:0003059!2.44e-14!83;UBERON:0007282!2.44e-14!83;UBERON:0009618!2.44e-14!83;UBERON:0007285!2.44e-14!83;UBERON:0004290!8.88e-14!70;UBERON:0000486!1.63e-13!82;UBERON:0004573!1.59e-12!33;UBERON:0004571!1.59e-12!33;UBERON:0001134!7.57e-12!61;UBERON:0002036!7.57e-12!61;UBERON:0003082!7.57e-12!61;UBERON:0002385!2.98e-11!63;UBERON:0001015!2.98e-11!63;UBERON:0000383!2.98e-11!63;UBERON:0004872!1.06e-09!84;UBERON:0005631!2.15e-09!14;UBERON:0000158!2.15e-09!14;UBERON:0002199!3.68e-09!45;UBERON:0002416!3.68e-09!45;UBERON:0002049!7.14e-09!79;UBERON:0007798!7.14e-09!79;UBERON:0002097!2.35e-08!40;UBERON:0001981!2.38e-08!60;UBERON:0007500!2.38e-08!60;UBERON:0004537!2.38e-08!60;UBERON:0006965!2.38e-08!60;UBERON:0005256!1.55e-07!143;UBERON:0004535!6.90e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.48e-10;2!UBERON:0002456;2.48e-10;2!UBERON:0000412;2.63e-07;3!UBERON:0002190;2.63e-07;3!UBERON:0001992;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.07e-10,2;UBERON:0002456,3.27e-10,2;UBERON:0004872,1.07e-07,83;UBERON:0002190,2.05e-07,3;UBERON:0000412,2.63e-07,3;UBERON:0001992,2.63e-07,3;UBERON:0001637,3.25e-07,42;UBERON:0003509,3.25e-07,42;UBERON:0004572,3.25e-07,42 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,1.74467704820074,0,1.89515962028049,0,0,0,0.436882744260345,0.263766978228454,0,0,0,1.80808358407193,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,5.95841313659485,0.573673241497627,0,0,1.06748995729705,0.24666754841716,0,0,0,0.605429710579726,0,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.226864366320042,0,0,0.635795703478686,0.300091096084402,0.103052529238439,0,0.18611685633159,0.337552664482532,0.389748020644795,0.252433774244115,0.368199594569197,0.323292113637624,0,0.201504196455281,0.508681776931463,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0.428933980974443,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0,0.391602314925481,0,0,0,0,0.606255142892519,3.32870879020994,0.30239029332968,0.744323423456331,0.61384789315225,0,0.512556597022804,0,0,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0,0,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.308097234229289,0,0,0.322260734604821,0.290033387828457,0,0.0890320356467374,0,0,0.893288987462089,0,0,0.94443704049192,0,0.308033580176089,0,0.869932992075073,0.74129687641568,0.143124886741991,0,0.949138274156178,0,0,0,0.318203247925937,0.78494864019923,0,0.274537029736055,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0,0.281695602532241,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0.449803112163605,0.776314784381297,0,0.797525143673985,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0.537052785212442,0,0.398095888698616,0.400027764663154,0.686791410365586,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|short_description=p@chr2:216325667..216325706,+ | |short_description=p@chr2:216325667..216325706,+ | ||
}} | }} |
Latest revision as of 06:20, 29 July 2015
Short description: | p@chr2:216325667..216325706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216325667..216325706, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 1.88e-19 | 1 |
smooth muscle cell of the internal thoracic artery | 3.27e-10 | 2 |
placental epithelial cell | 1.93e-07 | 3 |
subcutaneous fat cell | 2.05e-07 | 3 |
hair follicle dermal papilla cell | 2.63e-07 | 3 |
stem cell of epidermis | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.07e-10 | 2 |
internal thoracic artery | 3.27e-10 | 2 |
splanchnic layer of lateral plate mesoderm | 1.07e-07 | 83 |
subcutaneous adipose tissue | 2.05e-07 | 3 |
dermal papilla | 2.63e-07 | 3 |
papillary layer of dermis | 2.63e-07 | 3 |
artery | 3.25e-07 | 42 |
arterial blood vessel | 3.25e-07 | 42 |
arterial system | 3.25e-07 | 42 |