FFCP PHASE1:Hg19::chr12:11546891..11546902,-: Difference between revisions
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|id=chr12:11546891..11546902,-
|short_description=p8@PRB2
|description=CAGE_peak_8_at_PRB2_5end
|association_with_transcript=-378bp_to_K03208_5end
|EntrezGene=6532...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=653247 | |EntrezGene=653247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9338 | |HGNC=9338 | ||
|TSSclassifier=strong | |||
|UniProt=P02812 | |UniProt=P02812 | ||
|association_with_transcript=-378bp_to_K03208_5end | |||
|cluster_id=chr12:11546891..11546902,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_8_at_PRB2_5end | |||
|id=chr12:11546891..11546902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;5.42e-195;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.61e-131!2;UBERON:0001831!1.23e-66!1;UBERON:0001567!1.23e-66!1;UBERON:0008801!1.23e-66!1;UBERON:0001736!2.39e-66!1;UBERON:0006298!2.39e-66!1;UBERON:0001044!9.76e-45!6;UBERON:0003293!9.76e-45!6;UBERON:0003294!9.76e-45!6;UBERON:0010047!9.76e-45!6;UBERON:0000167!9.76e-45!6;UBERON:0004089!3.61e-34!2;UBERON:0000078!8.86e-34!18;UBERON:0000166!3.84e-29!21;UBERON:0003408!2.08e-27!10;UBERON:0001723!4.09e-23!3;UBERON:0001033!4.09e-23!3;UBERON:0010056!4.09e-23!3;UBERON:0000165!3.57e-22!28;UBERON:0000930!3.57e-22!28;UBERON:0000161!5.55e-18!35;UBERON:0001444!2.00e-13!48;UBERON:0002365!1.15e-09!31;UBERON:0002330!1.15e-09!31;UBERON:0001004!2.63e-09!72;UBERON:0001042!6.56e-08!10;UBERON:0009145!6.56e-08!10;UBERON:0006562!2.63e-07!11;UBERON:0003102!2.71e-07!95;UBERON:0001041!4.23e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;5.42e-195;1!UBERON:0001567;5.42e-195;1!UBERON:0001829;1.55e-98;2!UBERON:0004089;1.55e-98;2!UBERON:0001044;4.27e-34;6!UBERON:0003293;4.27e-34;6!UBERON:0003294;4.27e-34;6!UBERON:0010047;4.27e-34;6!UBERON:0003408;4.27e-34;6!UBERON:0000167;4.27e-34;6!UBERON:0001041;1.43e-15;14!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0001456;6.74e-11;21!UBERON:0000165;1.52e-08;28!UBERON:0002365;4.53e-08;31!UBERON:0002330;4.53e-08;31!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,5.42e-195,1;UBERON:0001567,5.42e-195,1;UBERON:0008801,5.42e-195,1;UBERON:0001829,1.55e-98,2;UBERON:0004089,1.55e-98,2;UBERON:0001044,4.27e-34,6;UBERON:0003293,4.27e-34,6;UBERON:0003294,4.27e-34,6;UBERON:0010047,4.27e-34,6;UBERON:0000167,4.27e-34,6;UBERON:0003408,3.81e-21,10;UBERON:0000166,1.80e-10,22;UBERON:0001456,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0002365,7.41e-08,31;UBERON:0002330,7.41e-08,31;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p8@PRB2 | |||
}} | }} |
Latest revision as of 14:52, 16 September 2015
Short description: | p8@PRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRB2_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -378bp_to_K03208_5end |
EntrezGene: | PRB2 |
HGNC: | 9338 |
UniProt: | P02812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 5.42e-195 | 1 |
cheek | 5.42e-195 | 1 |
parotid gland primordium | 5.42e-195 | 1 |
major salivary gland | 1.55e-98 | 2 |
midface | 1.55e-98 | 2 |
saliva-secreting gland | 4.27e-34 | 6 |
gland of oral region | 4.27e-34 | 6 |
gland of foregut | 4.27e-34 | 6 |
oral gland | 4.27e-34 | 6 |
oral cavity | 4.27e-34 | 6 |
gland of gut | 3.81e-21 | 10 |
oral opening | 1.80e-10 | 22 |
face | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
exocrine gland | 7.41e-08 | 31 |
exocrine system | 7.41e-08 | 31 |
orifice | 5.81e-07 | 36 |