FFCP PHASE1:Hg19::chr2:29440133..29440140,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29440133..29440140,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_at_chr2:29440133..29440140,- | |description=CAGE_peak_at_chr2:29440133..29440140,- | ||
|id=chr2:29440133..29440140,- | |id=chr2:29440133..29440140,- | ||
|ontology_enrichment_celltype=CL:0002619!3.62e-09!3;CL:0000342!2.84e-07!1;CL:0002565!2.84e-07!1;CL:0002127!4.60e-07!1;CL:0000914!4.60e-07!1;CL:0000911!4.60e-07!1;CL:0000814!4.60e-07!1;CL:0002042!4.60e-07!1;CL:0002039!4.60e-07!1;CL:0002040!4.60e-07!1;CL:0002041!4.60e-07!1;CL:0000313!4.89e-07!1 | |ontology_enrichment_celltype=CL:0002619!3.62e-09!3;CL:0000342!2.84e-07!1;CL:0002565!2.84e-07!1;CL:0002127!4.60e-07!1;CL:0000914!4.60e-07!1;CL:0000911!4.60e-07!1;CL:0000814!4.60e-07!1;CL:0002042!4.60e-07!1;CL:0002039!4.60e-07!1;CL:0002040!4.60e-07!1;CL:0002041!4.60e-07!1;CL:0000313!4.89e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.66e-21;5!CL:0002321;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5662!3.02e-07!1;DOID:2152!4.89e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:169;8.34e-18;6!DOID:0060058;2.87e-11;10!DOID:171;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10;DOID:0060058,3.02e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.68e-14!94;UBERON:0001016!4.68e-14!94;UBERON:0003075!2.80e-10!86;UBERON:0007284!2.80e-10!86;UBERON:0005743!2.91e-10!86;UBERON:0002346!1.04e-09!90;UBERON:0000988!1.50e-08!3;UBERON:0004121!2.04e-08!169;UBERON:0001049!2.62e-08!57;UBERON:0005068!2.62e-08!57;UBERON:0006241!2.62e-08!57;UBERON:0007135!2.62e-08!57;UBERON:0000924!3.87e-08!173;UBERON:0006601!3.87e-08!173;UBERON:0001017!8.30e-08!82;UBERON:0003056!1.14e-07!61;UBERON:0002506!2.84e-07!1;UBERON:0001769!2.84e-07!1;UBERON:0002022!4.08e-07!1;UBERON:0004911!4.89e-07!1;UBERON:0003296!5.05e-07!4;UBERON:0010133!5.05e-07!4;UBERON:0002298!6.12e-07!8;UBERON:0007190!6.97e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.66e-21;5!UBERON:0002410;4.66e-21;5!UBERON:0000010;2.31e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77386839888386,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77386839888386,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:29440133..29440140,- | |short_description=p@chr2:29440133..29440140,- | ||
}} | }} |
Latest revision as of 09:28, 29 July 2015
Short description: | p@chr2:29440133..29440140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29440133..29440140, - |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |
lymphoma | 3.02e-11 | 10 |