FFCP PHASE1:Hg19::chr2:89156940..89156955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=238bp_to_AJ294735_5end | |association_with_transcript=238bp_to_AJ294735_5end | ||
|cluster_id=chr2:89156940..89156955,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_6_at_AJ294735_5end | |description=CAGE_peak_6_at_AJ294735_5end | ||
|id=chr2:89156940..89156955,- | |id=chr2:89156940..89156955,- | ||
|ontology_enrichment_celltype=CL:0000236!3.27e-33!14;CL:0000945!3.02e-31!24;CL:0000826!3.02e-31!24;CL:0000838!1.46e-13!52;CL:0000542!3.21e-13!53;CL:0000051!3.21e-13!53;CL:0002087!1.39e-07!119;CL:0002031!4.60e-07!124;CL:0000785!7.31e-07!2;CL:0000955!7.31e-07!2;CL:0000818!7.31e-07!2;CL:0000954!7.31e-07!2;CL:0000816!7.31e-07!2 | |ontology_enrichment_celltype=CL:0000236!3.27e-33!14;CL:0000945!3.02e-31!24;CL:0000826!3.02e-31!24;CL:0000838!1.46e-13!52;CL:0000542!3.21e-13!53;CL:0000051!3.21e-13!53;CL:0002087!1.39e-07!119;CL:0002031!4.60e-07!124;CL:0000785!7.31e-07!2;CL:0000955!7.31e-07!2;CL:0000818!7.31e-07!2;CL:0000954!7.31e-07!2;CL:0000816!7.31e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.67e-32;13!CL:0000945;3.83e-25;24!CL:0000542;3.04e-08;53!CL:0000946;9.78e-07;1!CL:0000786;9.78e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.63e-36,14;CL:0000945,4.65e-25,24;CL:0000826,4.65e-25,24;CL:0000838,1.90e-10,52;CL:0000542,3.27e-10,53;CL:0000051,3.27e-10,53;CL:0000946,9.25e-07,1;CL:0000786,9.25e-07,1;CL:0000980,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.44e-11;2!CL:0000051;3.04e-08;53!UBERON:0006595;7.50e-08;86!UBERON:0004872;1.49e-07;7!UBERON:0001045;3.13e-07;1!UBERON:0006298;3.62e-07;1!UBERON:0009143;9.78e-07;1!UBERON:0005754;9.78e-07;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.24e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.36e-28!115;UBERON:0001829!3.49e-07!2;UBERON:0003408!5.64e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.52e-12;2!UBERON:0004921;2.01e-10;33!UBERON:0001044;7.71e-09;6!UBERON:0003293;7.71e-09;6!UBERON:0003294;7.71e-09;6!UBERON:0010047;7.71e-09;6!UBERON:0003408;7.71e-09;6!UBERON:0000167;7.71e-09;6!UBERON:0001154;3.13e-07;1!UBERON:0001153;3.13e-07;1!UBERON:0009854;3.13e-07;1!UBERON:0000029;3.32e-07;1!UBERON:0001736;3.62e-07;1!UBERON:0002171;3.62e-07;1!UBERON:0006518;3.62e-07;1!UBERON:0008949;3.62e-07;1!UBERON:0000101;3.62e-07;1!UBERON:0002167;3.62e-07;1!UBERON:0002372;4.43e-07;1!UBERON:0001961;4.43e-07;1!UBERON:0001744;4.43e-07;1!UBERON:0001042;4.43e-07;1!UBERON:0001735;4.43e-07;1!UBERON:0000998;9.78e-07;1!UBERON:0006868;9.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.19e-20,114;UBERON:0001829,5.84e-12,2;UBERON:0001044,8.13e-09,6;UBERON:0003293,8.13e-09,6;UBERON:0003294,8.13e-09,6;UBERON:0010047,8.13e-09,6;UBERON:0000167,8.13e-09,6;UBERON:0004921,2.10e-08,118;UBERON:0001154,3.13e-07,1;UBERON:0001153,3.13e-07,1;UBERON:0001045,3.13e-07,1;UBERON:0000029,3.32e-07,1;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145;UBERON:0002171,3.52e-07,1;UBERON:0006518,3.52e-07,1;UBERON:0008949,3.52e-07,1;UBERON:0000101,3.52e-07,1;UBERON:0002167,3.52e-07,1;UBERON:0001736,3.73e-07,1;UBERON:0006298,3.73e-07,1;UBERON:0002372,4.43e-07,1;UBERON:0001961,4.43e-07,1;UBERON:0001744,4.43e-07,1;UBERON:0001735,4.43e-07,1 | |||
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| ||
|short_description=p6@AJ294735 | |short_description=p6@AJ294735 | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p6@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 238bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.63e-36 | 14 |
lymphocyte of B lineage | 4.65e-25 | 24 |
pro-B cell | 4.65e-25 | 24 |
lymphoid lineage restricted progenitor cell | 1.90e-10 | 52 |
lymphocyte | 3.27e-10 | 53 |
common lymphoid progenitor | 3.27e-10 | 53 |
antibody secreting cell | 9.25e-07 | 1 |
plasma cell | 9.25e-07 | 1 |
plasmablast | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.19e-20 | 114 |
major salivary gland | 5.84e-12 | 2 |
saliva-secreting gland | 8.13e-09 | 6 |
gland of oral region | 8.13e-09 | 6 |
gland of foregut | 8.13e-09 | 6 |
oral gland | 8.13e-09 | 6 |
oral cavity | 8.13e-09 | 6 |
subdivision of digestive tract | 2.10e-08 | 118 |
vermiform appendix | 3.13e-07 | 1 |
caecum | 3.13e-07 | 1 |
midgut | 3.13e-07 | 1 |
lymph node | 3.32e-07 | 1 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |
lower lobe of right lung | 3.52e-07 | 1 |
right lung lobe | 3.52e-07 | 1 |
lower lobe of lung | 3.52e-07 | 1 |
lobe of lung | 3.52e-07 | 1 |
right lung | 3.52e-07 | 1 |
submandibular gland | 3.73e-07 | 1 |
submandibular gland primordium | 3.73e-07 | 1 |
tonsil | 4.43e-07 | 1 |
mucosa-associated lymphoid tissue | 4.43e-07 | 1 |
lymphoid tissue | 4.43e-07 | 1 |
tonsillar ring | 4.43e-07 | 1 |