FFCP PHASE1:Hg19::chr19:35899569..35899580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35899569..35899580,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr19:35899569..35899580,+ | |description=CAGE_peak_at_chr19:35899569..35899580,+ | ||
|id=chr19:35899569..35899580,+ | |id=chr19:35899569..35899580,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.77e-40!24;CL:0000826!3.77e-40!24;CL:0000838!2.88e-18!52;CL:0000542!6.54e-18!53;CL:0000051!6.54e-18!53;CL:0000946!2.25e-16!1;CL:0000786!2.25e-16!1;CL:0000980!2.25e-16!1;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0002087!1.54e-07!119;CL:0002031!3.29e-07!124 | |ontology_enrichment_celltype=CL:0000945!3.77e-40!24;CL:0000826!3.77e-40!24;CL:0000838!2.88e-18!52;CL:0000542!6.54e-18!53;CL:0000051!6.54e-18!53;CL:0000946!2.25e-16!1;CL:0000786!2.25e-16!1;CL:0000980!2.25e-16!1;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0002087!1.54e-07!119;CL:0002031!3.29e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.48e-34;24!CL:0000542;4.10e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.48e-34,24;CL:0000826,1.48e-34,24;CL:0000838,2.78e-16,52;CL:0000542,5.50e-16,53;CL:0000051,5.50e-16,53;CL:0002087,1.55e-07,115;CL:0002031,3.07e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.10e-08;53 | |||
|ontology_enrichment_disease=DOID:2355!8.86e-17!1;DOID:630!1.21e-16!1;DOID:0050177!1.21e-16!1;DOID:0050427!1.21e-16!1;DOID:0060058!1.61e-14!10;DOID:74!4.70e-09!2 | |ontology_enrichment_disease=DOID:2355!8.86e-17!1;DOID:630!1.21e-16!1;DOID:0050177!1.21e-16!1;DOID:0050427!1.21e-16!1;DOID:0060058!1.61e-14!10;DOID:74!4.70e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:2355;7.05e-34;1!DOID:74;1.07e-17;2!DOID:0060058;3.04e-14;10!DOID:1287;1.57e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,7.06e-34,1;DOID:74,1.07e-17,2;DOID:0060058,3.04e-14,10;DOID:1287,1.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!4.17e-46!3;UBERON:0004854!4.17e-46!3;UBERON:0009034!4.17e-46!3;UBERON:0002095!4.17e-46!3;UBERON:0004782!4.17e-46!3;UBERON:0003281!4.17e-46!3;UBERON:0009664!4.17e-46!3;UBERON:0002296!4.17e-46!3;UBERON:0005602!4.17e-46!3;UBERON:0001179!4.17e-46!3;UBERON:0006293!4.17e-46!3;UBERON:0004177!8.07e-35!7;UBERON:0000945!8.84e-18!8;UBERON:0010039!8.84e-18!8;UBERON:0001154!1.41e-16!1;UBERON:0001153!1.41e-16!1;UBERON:0004457!4.52e-12!12;UBERON:0000042!4.52e-12!12;UBERON:0005057!1.21e-09!26;UBERON:0002075!3.07e-08!18;UBERON:0003887!3.89e-07!21;UBERON:0005409!4.57e-07!35 | |ontology_enrichment_uberon=UBERON:0002106!4.17e-46!3;UBERON:0004854!4.17e-46!3;UBERON:0009034!4.17e-46!3;UBERON:0002095!4.17e-46!3;UBERON:0004782!4.17e-46!3;UBERON:0003281!4.17e-46!3;UBERON:0009664!4.17e-46!3;UBERON:0002296!4.17e-46!3;UBERON:0005602!4.17e-46!3;UBERON:0001179!4.17e-46!3;UBERON:0006293!4.17e-46!3;UBERON:0004177!8.07e-35!7;UBERON:0000945!8.84e-18!8;UBERON:0010039!8.84e-18!8;UBERON:0001154!1.41e-16!1;UBERON:0001153!1.41e-16!1;UBERON:0004457!4.52e-12!12;UBERON:0000042!4.52e-12!12;UBERON:0005057!1.21e-09!26;UBERON:0002075!3.07e-08!18;UBERON:0003887!3.89e-07!21;UBERON:0005409!4.57e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.85e-12;3!UBERON:0004177;5.35e-08;5!UBERON:0005057;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.85e-12,3;UBERON:0004854,1.85e-12,3;UBERON:0009034,1.85e-12,3;UBERON:0002095,1.85e-12,3;UBERON:0004782,1.85e-12,3;UBERON:0003281,1.85e-12,3;UBERON:0009664,1.85e-12,3;UBERON:0002296,1.85e-12,3;UBERON:0005602,1.85e-12,3;UBERON:0001179,1.85e-12,3;UBERON:0006293,1.85e-12,3 | |||
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|short_description=p@chr19:35899569..35899580,+ | |short_description=p@chr19:35899569..35899580,+ | ||
}} | }} |
Latest revision as of 06:43, 26 July 2015
Short description: | p@chr19:35899569..35899580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35899569..35899580, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.48e-34 | 24 |
pro-B cell | 1.48e-34 | 24 |
lymphoid lineage restricted progenitor cell | 2.78e-16 | 52 |
lymphocyte | 5.50e-16 | 53 |
common lymphoid progenitor | 5.50e-16 | 53 |
nongranular leukocyte | 1.55e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.07e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.85e-12 | 3 |
gastrointestinal system mesentery | 1.85e-12 | 3 |
stomach region | 1.85e-12 | 3 |
mesentery | 1.85e-12 | 3 |
gastrointestinal system serosa | 1.85e-12 | 3 |
mesentery of stomach | 1.85e-12 | 3 |
gut mesentery | 1.85e-12 | 3 |
dorsal mesentery | 1.85e-12 | 3 |
dorsal mesogastrium | 1.85e-12 | 3 |
peritoneal cavity | 1.85e-12 | 3 |
spleen primordium | 1.85e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 7.06e-34 | 1 |
hematopoietic system disease | 1.07e-17 | 2 |
lymphoma | 3.04e-14 | 10 |
cardiovascular system disease | 1.57e-09 | 4 |