FFCP PHASE1:Hg19::chr2:98703623..98703635,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200403 | |EntrezGene=200403 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28385 | |HGNC=28385 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000433678_5end | |association_with_transcript=-4bp_to_ENST00000433678_5end | ||
|cluster_id=chr2:98703623..98703635,+ | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_VWA3B_5end | |description=CAGE_peak_2_at_VWA3B_5end | ||
|id=chr2:98703623..98703635,+ | |id=chr2:98703623..98703635,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.94e-08!42;CL:0000766!1.08e-07!76;CL:0000860!1.39e-07!45 | |ontology_enrichment_celltype=CL:0002057!1.94e-08!42;CL:0000766!1.08e-07!76;CL:0000860!1.39e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-12;33!CL:0002057;1.50e-12;33!CL:0000473;3.94e-09;39!CL:0000234;3.94e-09;39!CL:0000236;1.96e-07;13!CL:0000576;3.45e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.08e-10,42;CL:0002057,2.08e-10,42;CL:0000473,6.33e-09,48;CL:0000234,6.33e-09,48;CL:0002194,7.48e-07,59;CL:0000576,7.48e-07,59;CL:0000040,7.48e-07,59;CL:0000559,7.48e-07,59;CL:0000236,7.57e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-10!115;UBERON:0001894!9.11e-09!7;UBERON:0006222!9.11e-09!7;UBERON:0002298!1.18e-07!8;UBERON:0001049!1.34e-07!57;UBERON:0005068!1.34e-07!57;UBERON:0006241!1.34e-07!57;UBERON:0007135!1.34e-07!57;UBERON:0001017!2.25e-07!82;UBERON:0005743!9.44e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.00e-13;2!UBERON:0000341;4.46e-13;2!UBERON:0001301;1.56e-07;1!UBERON:0002336;3.20e-07;1!UBERON:0002171;3.20e-07;1!UBERON:0011215;3.20e-07;1!UBERON:0001018;3.20e-07;1!UBERON:0006518;3.20e-07;1!UBERON:0008949;3.20e-07;1!UBERON:0002473;3.20e-07;1!UBERON:0005340;3.20e-07;1!UBERON:0003544;3.20e-07;1!UBERON:0005970;3.20e-07;1!UBERON:0002316;3.20e-07;1!UBERON:0001020;3.20e-07;1!UBERON:0000101;3.20e-07;1!UBERON:0002167;3.20e-07;1!UBERON:0002437;3.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.04e-13,2;UBERON:0000341,2.99e-13,2;UBERON:0007023,5.51e-09,114;UBERON:0001301,1.83e-07,1;UBERON:0002336,2.83e-07,1;UBERON:0011215,2.83e-07,1;UBERON:0001018,2.83e-07,1;UBERON:0002473,2.83e-07,1;UBERON:0005340,2.83e-07,1;UBERON:0003544,2.83e-07,1;UBERON:0005970,2.83e-07,1;UBERON:0002316,2.83e-07,1;UBERON:0001020,2.83e-07,1;UBERON:0002437,2.83e-07,1;UBERON:0002171,4.09e-07,1;UBERON:0006518,4.09e-07,1;UBERON:0008949,4.09e-07,1;UBERON:0000101,4.09e-07,1;UBERON:0002167,4.09e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,2.8769239232215,3.07392847834921,3.31075121844019,0,0,0,0,0,0,0,0.320929027076094,0,1.31940520074686,3.19141852194611,2.13112375266347,0,0,0,1.25624332628372,2.08593167368081,3.25783267057675,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.79323189425963,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0.344743373241465,0,0,3.54296554325536,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0.325942115766024,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,1.61762719153625,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,2.09672001890436,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0.213452994739353,0,0.864542502924636,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.26446520348538,0,0,1.9221734262185,3.45849471219265,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,2.86704597845036,0.776503360757966,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.91064876540519,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.671132590786754,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,4.31938579843965,8.30688803484153,2.48750831837634,0.20686599172379,1.91910583710883,2.3806443146374,0,0.124149428591716,0,0,0,0.217716747896961,0,0,6.16810966377017,2.32862249582209,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0,2.8769239232215,3.07392847834921,3.31075121844019,0,0,0,0,0,0,0,0.320929027076094,0,1.31940520074686,3.19141852194611,2.13112375266347,0,0,0,1.25624332628372,2.08593167368081,3.25783267057675,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33996642519167,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,1.52927441428475,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,1.79323189425963,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0.344743373241465,0,0,3.54296554325536,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0.23056390438806,0,0.325942115766024,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,1.61762719153625,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,2.09672001890436,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.782205530939212,0,0.213452994739353,0,0.864542502924636,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.26446520348538,0,0,1.9221734262185,3.45849471219265,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,2.86704597845036,0.776503360757966,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,1.0529445968896,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0.91064876540519,0,0,0,0.0679697329768317,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.671132590786754,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,4.31938579843965,8.30688803484153,2.48750831837634,0.20686599172379,1.91910583710883,2.3806443146374,0,0.124149428591716,0,0,0,0.217716747896961,0,0,6.16810966377017,2.32862249582209,0,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p2@VWA3B | |short_description=p2@VWA3B | ||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p2@VWA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VWA3B_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | -4bp_to_ENST00000433678_5end |
EntrezGene: | VWA3B |
HGNC: | 28385 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.08e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.08e-10 | 42 |
defensive cell | 6.33e-09 | 48 |
phagocyte | 6.33e-09 | 48 |
monopoietic cell | 7.48e-07 | 59 |
monocyte | 7.48e-07 | 59 |
monoblast | 7.48e-07 | 59 |
promonocyte | 7.48e-07 | 59 |
B cell | 7.57e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.04e-13 | 2 |
throat | 2.99e-13 | 2 |
adult organism | 5.51e-09 | 114 |
epididymis | 1.83e-07 | 1 |
corpus callosum | 2.83e-07 | 1 |
central nervous system cell part cluster | 2.83e-07 | 1 |
axon tract | 2.83e-07 | 1 |
intercerebral commissure | 2.83e-07 | 1 |
dorsal telencephalic commissure | 2.83e-07 | 1 |
brain white matter | 2.83e-07 | 1 |
brain commissure | 2.83e-07 | 1 |
white matter | 2.83e-07 | 1 |
nervous system commissure | 2.83e-07 | 1 |
cerebral hemisphere white matter | 2.83e-07 | 1 |
lower lobe of right lung | 4.09e-07 | 1 |
right lung lobe | 4.09e-07 | 1 |
lower lobe of lung | 4.09e-07 | 1 |
lobe of lung | 4.09e-07 | 1 |
right lung | 4.09e-07 | 1 |