FFCP PHASE1:Hg19::chr19:49128245..49128254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56848 | |EntrezGene=56848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18859 | |HGNC=18859 | ||
|TSSclassifier=strong | |||
|UniProt=A0T4C8 | |UniProt=A0T4C8 | ||
|association_with_transcript=19bp_to_uc002pjw.2_5end | |association_with_transcript=19bp_to_uc002pjw.2_5end | ||
|cluster_id=chr19:49128245..49128254,+ | |||
|coexpression_cluster_id=C894 | |||
|description=CAGE_peak_13_at_SPHK2_5end | |description=CAGE_peak_13_at_SPHK2_5end | ||
|id=chr19:49128245..49128254,+ | |id=chr19:49128245..49128254,+ | ||
|ontology_enrichment_celltype=CL:0000223!9.90e-09!59;CL:0002178!1.34e-07!3;CL:0000181!3.60e-07!12;CL:0000417!3.60e-07!12;CL:0000668!3.60e-07!12;CL:0000414!3.60e-07!12;CL:0000412!3.60e-07!12;CL:0000182!3.60e-07!12 | |ontology_enrichment_celltype=CL:0000223!9.90e-09!59;CL:0002178!1.34e-07!3;CL:0000181!3.60e-07!12;CL:0000417!3.60e-07!12;CL:0000668!3.60e-07!12;CL:0000414!3.60e-07!12;CL:0000412!3.60e-07!12;CL:0000182!3.60e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.62e-25;4!CL:0002253;1.21e-13;2!CL:0002535;1.21e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.43e-25,4;CL:0002253,1.07e-13,2;CL:0002535,1.55e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.90e-11!2 | |ontology_enrichment_disease=DOID:3493!2.90e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.45e-16!35;UBERON:0000160!1.77e-11!27;UBERON:0004921!1.05e-10!129;UBERON:0004185!1.05e-10!129;UBERON:0001007!1.73e-10!155;UBERON:0001555!1.73e-10!155;UBERON:0007026!1.73e-10!155;UBERON:0009497!1.83e-09!25;UBERON:0000015!1.83e-09!25;UBERON:0002423!1.83e-09!25;UBERON:0006235!1.83e-09!25;UBERON:0004161!1.83e-09!25;UBERON:0004119!2.96e-09!169;UBERON:0000925!2.96e-09!169;UBERON:0006595!2.96e-09!169;UBERON:0000059!2.67e-08!11;UBERON:0003929!4.12e-08!54;UBERON:0002110!6.96e-08!3;UBERON:0006242!6.96e-08!3;UBERON:0005172!9.96e-08!55;UBERON:0005173!9.96e-08!55;UBERON:0007499!4.28e-07!25;UBERON:0002417!8.44e-07!61;UBERON:0000916!8.44e-07!61;UBERON:0009856!8.44e-07!26;UBERON:0002107!8.92e-07!19;UBERON:0006925!8.92e-07!19;UBERON:0008836!8.92e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.14e-27;22!UBERON:0001242;1.62e-25;4!UBERON:0001262;1.62e-25;4!UBERON:0004786;1.62e-25;4!UBERON:0004808;1.62e-25;4!UBERON:0001277;1.62e-25;4!UBERON:0000160;1.77e-22;17!UBERON:0004921;3.67e-18;33!UBERON:0000485;4.69e-15;7!UBERON:0003929;4.69e-15;7!UBERON:0006955;1.21e-13;2!UBERON:0004801;1.21e-13;2!UBERON:0003350;2.65e-13;8!UBERON:0001155;5.08e-12;9!UBERON:0000059;5.17e-10;11!UBERON:0001555;8.83e-09;54!UBERON:0001052;1.80e-07;4!UBERON:0001007;3.34e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.43e-25,4;UBERON:0001262,1.43e-25,4;UBERON:0004786,1.43e-25,4;UBERON:0004808,1.43e-25,4;UBERON:0001277,1.43e-25,4;UBERON:0005409,4.19e-24,25;UBERON:0000160,1.63e-22,17;UBERON:0006955,1.55e-13,2;UBERON:0004801,1.55e-13,2;UBERON:0003350,2.49e-13,8;UBERON:0001155,4.67e-12,9;UBERON:0000485,5.83e-12,9;UBERON:0000059,4.83e-10,11;UBERON:0004921,1.29e-07,118;UBERON:0001052,1.69e-07,4 | |||
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|short_description=p13@SPHK2 | |short_description=p13@SPHK2 | ||
}} | }} |
Latest revision as of 03:19, 19 September 2015
Short description: | p13@SPHK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SPHK2_5end |
Coexpression cluster: | C894_small_hepatoblastoma_colon_hepatocellular_liver_Intestinal_Prostate |
Association with transcript: | 19bp_to_uc002pjw.2_5end |
EntrezGene: | SPHK2 |
HGNC: | 18859 |
UniProt: | A0T4C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.43e-25 | 4 |
epithelial cell of large intestine | 1.07e-13 | 2 |
epithelial cell of cervix | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.43e-25 | 4 |
wall of intestine | 1.43e-25 | 4 |
gastrointestinal system mucosa | 1.43e-25 | 4 |
gastrointestinal system epithelium | 1.43e-25 | 4 |
intestinal epithelium | 1.43e-25 | 4 |
gastrointestinal system | 4.19e-24 | 25 |
intestine | 1.63e-22 | 17 |
uterine epithelium | 1.55e-13 | 2 |
cervix epithelium | 1.55e-13 | 2 |
epithelium of mucosa | 2.49e-13 | 8 |
colon | 4.67e-12 | 9 |
simple columnar epithelium | 5.83e-12 | 9 |
large intestine | 4.83e-10 | 11 |
subdivision of digestive tract | 1.29e-07 | 118 |
rectum | 1.69e-07 | 4 |