FFCP PHASE1:Hg19::chr19:56070737..56070738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56070737..56070738,- | |||
|coexpression_cluster_id=C1244 | |||
|description=CAGE_peak_at_chr19:56070737..56070738,- | |description=CAGE_peak_at_chr19:56070737..56070738,- | ||
|id=chr19:56070737..56070738,- | |id=chr19:56070737..56070738,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002595;6.99e-21;5!CL:0002593;6.43e-14;2!CL:0000135;1.47e-09;3!CL:0002541;1.47e-09;3!CL:0002567;1.47e-09;3!CL:0000388;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,6.01e-21,5;CL:0002593,6.43e-14,2;CL:0000135,1.19e-09,3;CL:0000388,1.19e-09,3;CL:0002567,1.67e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;6.99e-21;5!UBERON:0001533;6.99e-21;5!UBERON:0003513;3.17e-15;7!UBERON:0002456;6.43e-14;2!UBERON:0007846;1.47e-09;3!UBERON:0000043;1.47e-09;3!UBERON:0007845;1.47e-09;3!UBERON:0003124;1.47e-09;3!UBERON:0000920;1.47e-09;3!UBERON:0002119;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,6.01e-21,5;UBERON:0001533,6.01e-21,5;UBERON:0003513,2.85e-15,7;UBERON:0002456,6.43e-14,2;UBERON:0007846,1.19e-09,3;UBERON:0000043,1.19e-09,3;UBERON:0007845,1.19e-09,3;UBERON:0000920,1.81e-09,3;UBERON:0002119,1.69e-07,4 | |||
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| ||
|short_description=p@chr19:56070737..56070738,- | |short_description=p@chr19:56070737..56070738,- | ||
}} | }} |
Latest revision as of 17:33, 27 July 2015
Short description: | p@chr19:56070737..56070738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56070737..56070738, - |
Coexpression cluster: | C1244_Smooth_mesenchymal_Fibroblast_mesothelioma_gall_Melanocyte_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 6.01e-21 | 5 |
smooth muscle cell of the internal thoracic artery | 6.43e-14 | 2 |
fibrocyte | 1.19e-09 | 3 |
tendon cell | 1.19e-09 | 3 |
light melanocyte | 1.67e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 6.01e-21 | 5 |
subclavian artery | 6.01e-21 | 5 |
trunk blood vessel | 2.85e-15 | 7 |
internal thoracic artery | 6.43e-14 | 2 |
dense regular connective tissue | 1.19e-09 | 3 |
tendon | 1.19e-09 | 3 |
regular connective tissue | 1.19e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
left ovary | 1.69e-07 | 4 |