FFCP PHASE1:Hg19::chr3:196230518..196230539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165918 | |EntrezGene=165918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26661 | |HGNC=26661 | ||
|TSSclassifier=strong | |||
|UniProt=F8WD60 | |UniProt=F8WD60 | ||
|association_with_transcript=8bp_to_ENST00000437070_5end | |association_with_transcript=8bp_to_ENST00000437070_5end | ||
|cluster_id=chr3:196230518..196230539,- | |||
|description=CAGE_peak_3_at_RNF168_5end | |description=CAGE_peak_3_at_RNF168_5end | ||
|id=chr3:196230518..196230539,- | |id=chr3:196230518..196230539,- | ||
|ontology_enrichment_celltype=CL:0000738!2.43e-12!140;CL:0000037!5.63e-12!172;CL:0000566!5.63e-12!172;CL:0000988!3.05e-11!182;CL:0002032!3.11e-10!165;CL:0000837!3.11e-10!165;CL:0002087!9.89e-09!119;CL:0002031!1.99e-08!124;CL:0000860!2.76e-08!45;CL:0002057!6.62e-07!42;CL:0000766!9.88e-07!76 | |ontology_enrichment_celltype=CL:0000738!2.43e-12!140;CL:0000037!5.63e-12!172;CL:0000566!5.63e-12!172;CL:0000988!3.05e-11!182;CL:0002032!3.11e-10!165;CL:0000837!3.11e-10!165;CL:0002087!9.89e-09!119;CL:0002031!1.99e-08!124;CL:0000860!2.76e-08!45;CL:0002057!6.62e-07!42;CL:0000766!9.88e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.75e-08;33!CL:0002057;3.75e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.28e-15,136;CL:0000988,1.17e-14,177;CL:0000037,1.81e-14,168;CL:0002032,1.80e-12,161;CL:0000837,1.80e-12,161;CL:0002087,4.40e-11,115;CL:0002031,1.76e-10,120;CL:0000542,1.72e-07,53;CL:0000051,1.72e-07,53;CL:0000219,2.72e-07,386;CL:0000860,3.00e-07,42;CL:0002057,3.00e-07,42;CL:0000838,3.82e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.63e-24!235;DOID:14566!9.69e-24!239;DOID:305!7.86e-17!106;DOID:0050687!4.98e-16!143;DOID:0050686!7.32e-13!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.60e-18,235;DOID:14566,1.64e-17,239;DOID:305,6.20e-14,106;DOID:0050687,1.04e-12,143;DOID:0050686,4.60e-09,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@RNF168 | |short_description=p3@RNF168 | ||
}} | }} |
Latest revision as of 15:34, 17 September 2015
Short description: | p3@RNF168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RNF168_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000437070_5end |
EntrezGene: | RNF168 |
HGNC: | 26661 |
UniProt: | F8WD60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.28e-15 | 136 |
hematopoietic cell | 1.17e-14 | 177 |
hematopoietic stem cell | 1.81e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-12 | 161 |
nongranular leukocyte | 4.40e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.76e-10 | 120 |
lymphocyte | 1.72e-07 | 53 |
common lymphoid progenitor | 1.72e-07 | 53 |
motile cell | 2.72e-07 | 386 |
classical monocyte | 3.00e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-07 | 42 |
lymphoid lineage restricted progenitor cell | 3.82e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.60e-18 | 235 |
disease of cellular proliferation | 1.64e-17 | 239 |
carcinoma | 6.20e-14 | 106 |
cell type cancer | 1.04e-12 | 143 |
organ system cancer | 4.60e-09 | 137 |