FFCP PHASE1:Hg19::chr1:153321274..153321283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57115 | |EntrezGene=57115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30015 | |HGNC=30015 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENST00000368739_5end | |association_with_transcript=32bp_to_ENST00000368739_5end | ||
|cluster_id=chr1:153321274..153321283,- | |||
|description=CAGE_peak_2_at_PGLYRP4_5end | |description=CAGE_peak_2_at_PGLYRP4_5end | ||
|id=chr1:153321274..153321283,- | |id=chr1:153321274..153321283,- | ||
|ontology_enrichment_celltype=CL:0002159!3.50e-25!13;CL:0000317!6.44e-20!2;CL:1000448!6.44e-20!2;CL:0002308!6.44e-20!2;CL:0002140!6.44e-20!2;CL:0000575!8.54e-20!2;CL:0000622!1.76e-17!5;CL:0000154!1.15e-14!6;CL:0002077!5.38e-13!33;CL:0002621!6.56e-13!3;CL:0002076!1.43e-12!43;CL:0000362!4.32e-11!8;CL:0002251!9.00e-11!21;CL:0000150!5.92e-10!9;CL:0000223!6.85e-09!59;CL:0000066!1.31e-07!254;CL:0002368!7.41e-07!13 | |ontology_enrichment_celltype=CL:0002159!3.50e-25!13;CL:0000317!6.44e-20!2;CL:1000448!6.44e-20!2;CL:0002308!6.44e-20!2;CL:0002140!6.44e-20!2;CL:0000575!8.54e-20!2;CL:0000622!1.76e-17!5;CL:0000154!1.15e-14!6;CL:0002077!5.38e-13!33;CL:0002621!6.56e-13!3;CL:0002076!1.43e-12!43;CL:0000362!4.32e-11!8;CL:0002251!9.00e-11!21;CL:0000150!5.92e-10!9;CL:0000223!6.85e-09!59;CL:0000066!1.31e-07!254;CL:0002368!7.41e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.55e-98;2!CL:1000448;1.55e-98;2!CL:0002308;1.55e-98;2!CL:0002140;1.55e-98;2!CL:0000622;2.71e-40;5!CL:0000154;8.35e-34;6!CL:0002159;1.72e-32;14!CL:0000575;6.30e-26;2!CL:0000150;5.74e-23;9!CL:0000362;5.74e-23;9!CL:0002328;8.69e-18;3!CL:0002077;2.60e-13;34!CL:0002202;8.14e-07;9!CL:0002632;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.55e-98,2;CL:1000448,1.55e-98,2;CL:0002308,1.55e-98,2;CL:0002140,1.55e-98,2;CL:0000622,2.71e-40,5;CL:0000154,8.35e-34,6;CL:0002159,1.46e-32,14;CL:0000575,4.32e-26,2;CL:0000150,5.74e-23,9;CL:0000362,5.74e-23,9;CL:0002328,1.12e-17,3;CL:0002077,5.01e-14,34;CL:0000076,5.58e-08,63;CL:0000221,6.51e-07,72;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.50e-10!1;DOID:3149!2.50e-10!1 | |ontology_enrichment_disease=DOID:3151!2.50e-10!1;DOID:3149!2.50e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!6.44e-20!2;UBERON:0007771!6.44e-20!2;UBERON:0003297!6.44e-20!2;UBERON:0001821!6.44e-20!2;UBERON:0003487!6.44e-20!2;UBERON:0001820!6.44e-20!2;UBERON:0005089!6.44e-20!2;UBERON:0005088!6.44e-20!2;UBERON:0001949!6.56e-13!3;UBERON:0000166!1.25e-10!21;UBERON:0000964!2.28e-10!4;UBERON:0004348!2.28e-10!4;UBERON:0005427!2.28e-10!4;UBERON:0000997!3.01e-10!1;UBERON:0005056!3.01e-10!1;UBERON:0002372!4.33e-10!1;UBERON:0001961!4.33e-10!1;UBERON:0001744!4.33e-10!1;UBERON:0001735!4.33e-10!1;UBERON:0001043!5.46e-10!4;UBERON:0009143!5.46e-10!4;UBERON:0003102!6.53e-10!95;UBERON:0001004!6.96e-09!72;UBERON:0001444!1.39e-08!48;UBERON:0000165!6.21e-08!28;UBERON:0000930!6.21e-08!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.55e-98;2!UBERON:0007771;1.55e-98;2!UBERON:0003297;1.55e-98;2!UBERON:0001821;1.55e-98;2!UBERON:0003487;1.55e-98;2!UBERON:0001820;1.55e-98;2!UBERON:0004815;8.69e-18;3!UBERON:0002031;8.69e-18;3!UBERON:0001003;2.94e-14;15!UBERON:0007376;2.94e-14;15!UBERON:0000964;1.06e-13;4!UBERON:0010409;1.06e-13;4!UBERON:0002185;3.10e-11;5!UBERON:0003102;1.35e-09;50!UBERON:0000485;2.11e-08;7!UBERON:0002365;1.17e-07;31!UBERON:0002330;1.17e-07;31!UBERON:0010371;3.58e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.55e-98,2;UBERON:0007771,1.55e-98,2;UBERON:0003297,1.55e-98,2;UBERON:0001821,1.55e-98,2;UBERON:0003487,1.55e-98,2;UBERON:0001820,1.55e-98,2;UBERON:0005089,1.55e-98,2;UBERON:0005088,1.55e-98,2;UBERON:0004815,1.12e-17,3;UBERON:0002031,1.12e-17,3;UBERON:0005085,2.73e-15,31;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15;UBERON:0000964,8.82e-14,4;UBERON:0010409,8.82e-14,4;UBERON:0004348,8.82e-14,4;UBERON:0005427,8.82e-14,4;UBERON:0002185,3.60e-11,5;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31;UBERON:0000485,8.85e-07,9 | |||
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|short_description=p2@PGLYRP4 | |short_description=p2@PGLYRP4 | ||
}} | }} |
Latest revision as of 04:54, 17 September 2015
Short description: | p2@PGLYRP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGLYRP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000368739_5end |
EntrezGene: | PGLYRP4 |
HGNC: | 30015 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.55e-98 | 2 |
epithelial cell of sweat gland | 1.55e-98 | 2 |
epithelial cell of skin gland | 1.55e-98 | 2 |
acinar cell of sebaceous gland | 1.55e-98 | 2 |
acinar cell | 2.71e-40 | 5 |
protein secreting cell | 8.35e-34 | 6 |
general ecto-epithelial cell | 1.46e-32 | 14 |
corneal epithelial cell | 4.32e-26 | 2 |
glandular epithelial cell | 5.74e-23 | 9 |
epidermal cell | 5.74e-23 | 9 |
bronchial epithelial cell | 1.12e-17 | 3 |
ecto-epithelial cell | 5.01e-14 | 34 |
squamous epithelial cell | 5.58e-08 | 63 |
ectodermal cell | 6.51e-07 | 72 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.55e-98 | 2 |
epidermis gland | 1.55e-98 | 2 |
gland of integumental system | 1.55e-98 | 2 |
sebaceous gland | 1.55e-98 | 2 |
skin sebaceous gland | 1.55e-98 | 2 |
sweat gland | 1.55e-98 | 2 |
sweat gland placode | 1.55e-98 | 2 |
sebaceous gland placode | 1.55e-98 | 2 |
lower respiratory tract epithelium | 1.12e-17 | 3 |
epithelium of bronchus | 1.12e-17 | 3 |
ectodermal placode | 2.73e-15 | 31 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
cornea | 8.82e-14 | 4 |
eye surface | 8.82e-14 | 4 |
optic eminence | 8.82e-14 | 4 |
corneal primordium | 8.82e-14 | 4 |
bronchus | 3.60e-11 | 5 |
exocrine gland | 1.92e-07 | 31 |
exocrine system | 1.92e-07 | 31 |
simple columnar epithelium | 8.85e-07 | 9 |