FFCP PHASE1:Hg19::chr12:52478546..52478552,+: Difference between revisions
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|id=chr12:52478546..52478552,+
|short_description=p@chr12:52478546..52478552,+
|description=CAGE_peak_at_chr12:52478546..52478552,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52478546..52478552,+ | |||
|coexpression_cluster_id=C2213 | |||
|description=CAGE_peak_at_chr12:52478546..52478552,+ | |||
|id=chr12:52478546..52478552,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;3.27e-23;3!UBERON:0003353;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!1.07e-23!1;UBERON:0001961!1.07e-23!1;UBERON:0001744!1.07e-23!1;UBERON:0001735!1.07e-23!1;UBERON:0001736!2.62e-23!1;UBERON:0006298!2.62e-23!1;UBERON:0003408!1.91e-20!10;UBERON:0001042!1.91e-20!10;UBERON:0009145!1.91e-20!10;UBERON:0000078!4.29e-20!18;UBERON:0006562!1.17e-18!11;UBERON:0000166!2.70e-17!21;UBERON:0000161!4.96e-16!35;UBERON:0001044!9.04e-16!6;UBERON:0003293!9.04e-16!6;UBERON:0003294!9.04e-16!6;UBERON:0010047!9.04e-16!6;UBERON:0000167!9.04e-16!6;UBERON:0000165!4.37e-13!28;UBERON:0000930!4.37e-13!28;UBERON:0001829!2.32e-12!2;UBERON:0003127!2.90e-12!2;UBERON:0000341!3.24e-12!2;UBERON:0007023!4.30e-12!115;UBERON:0001557!4.22e-11!19;UBERON:0001004!4.97e-11!72;UBERON:0000974!1.15e-09!10;UBERON:0001723!1.21e-08!3;UBERON:0001033!1.21e-08!3;UBERON:0010056!1.21e-08!3;UBERON:0000077!3.53e-08!130;UBERON:0004921!3.53e-08!129;UBERON:0004185!3.53e-08!129;UBERON:0001041!4.33e-08!98;UBERON:0000072!4.89e-08!46;UBERON:0001444!8.73e-08!48;UBERON:0000065!5.13e-07!53;UBERON:0001007!9.00e-07!155;UBERON:0001555!9.00e-07!155;UBERON:0007026!9.00e-07!155;UBERON:0008814!9.09e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.39e-66;1!UBERON:0001961;2.39e-66;1!UBERON:0001744;2.39e-66;1!UBERON:0001042;2.39e-66;1!UBERON:0001735;2.39e-66;1!UBERON:0006562;5.04e-34;2!UBERON:0000161;5.27e-15;19!UBERON:0000166;5.27e-15;19!UBERON:0001044;2.45e-12;6!UBERON:0003293;2.45e-12;6!UBERON:0003294;2.45e-12;6!UBERON:0010047;2.45e-12;6!UBERON:0003408;2.45e-12;6!UBERON:0000167;2.45e-12;6!UBERON:0000165;1.47e-10;28!UBERON:0004921;5.60e-08;33!UBERON:0002465;6.13e-08;10!UBERON:0002367;2.47e-07;11!UBERON:0010147;2.47e-07;11!UBERON:0003937;7.92e-07;12!UBERON:0005399;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.23e-66,1;UBERON:0001961,1.23e-66,1;UBERON:0001744,1.23e-66,1;UBERON:0001735,1.23e-66,1;UBERON:0000161,1.62e-17,36;UBERON:0000166,3.77e-13,22;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0000165,2.96e-10,29;UBERON:0000930,2.96e-10,29;UBERON:0002465,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0002367,2.63e-07,11;UBERON:0010147,2.63e-07,11;UBERON:0009846,2.63e-07,11;UBERON:0003353,2.63e-07,11;UBERON:0004902,2.63e-07,11;UBERON:0003820,2.63e-07,11;UBERON:0009847,2.63e-07,11;UBERON:0003102,4.88e-07,99;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12 | |||
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|short_description=p@chr12:52478546..52478552,+ | |||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p@chr12:52478546..52478552, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52478546..52478552, + |
Coexpression cluster: | C2213_salivary_esophagus_tonsil_throat_tongue_submaxillary_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 1.23e-66 | 1 |
mucosa-associated lymphoid tissue | 1.23e-66 | 1 |
lymphoid tissue | 1.23e-66 | 1 |
tonsillar ring | 1.23e-66 | 1 |
orifice | 1.62e-17 | 36 |
oral opening | 3.77e-13 | 22 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
mouth | 2.96e-10 | 29 |
stomodeum | 2.96e-10 | 29 |
lymphoid system | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
pharynx | 2.32e-07 | 11 |
prostate gland | 2.63e-07 | 11 |
male accessory sex gland | 2.63e-07 | 11 |
embryonic cloacal epithelium | 2.63e-07 | 11 |
epithelium of hindgut | 2.63e-07 | 11 |
urogenital sinus epithelium | 2.63e-07 | 11 |
prostate bud | 2.63e-07 | 11 |
prostate field | 2.63e-07 | 11 |
surface structure | 4.88e-07 | 99 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |