FFCP PHASE1:Hg19::chr4:177714178..177714187,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7424 | |EntrezGene=7424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12682 | |HGNC=12682 | ||
|TSSclassifier=strong | |||
|UniProt=P49767 | |UniProt=P49767 | ||
|association_with_transcript=-283bp_to_NM_005429,uc003ius.1_5end | |association_with_transcript=-283bp_to_NM_005429,uc003ius.1_5end | ||
|cluster_id=chr4:177714178..177714187,- | |||
|description=CAGE_peak_9_at_VEGFC_5end | |description=CAGE_peak_9_at_VEGFC_5end | ||
|id=chr4:177714178..177714187,- | |id=chr4:177714178..177714187,- | ||
|ontology_enrichment_celltype=CL:0000055!7.95e-25!180;CL:0000057!1.08e-23!75;CL:0002620!4.79e-10!23;CL:0002371!1.13e-08!591;CL:0000144!1.18e-07!625;CL:0002334!9.92e-07!12 | |ontology_enrichment_celltype=CL:0000055!7.95e-25!180;CL:0000057!1.08e-23!75;CL:0002620!4.79e-10!23;CL:0002371!1.13e-08!591;CL:0000144!1.18e-07!625;CL:0002334!9.92e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.68e-16;23!CL:0002573;4.08e-09;2!CL:1000306;1.74e-07;4!CL:0002547;1.74e-07;4!CL:0000056;3.30e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.39e-16,23;CL:0000057,4.87e-13,76;CL:0002573,9.20e-10,2;CL:0000515,2.36e-07,4;CL:1000306,2.74e-07,4;CL:0002547,2.74e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.30e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!1.97e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.62e-16;14!DOID:120;2.42e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.03e-16,14;DOID:120,2.19e-07,27;DOID:193,9.23e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.92e-13!95;UBERON:0000914!1.70e-10!83;UBERON:0002329!1.70e-10!83;UBERON:0003077!1.70e-10!83;UBERON:0003059!1.70e-10!83;UBERON:0007282!1.70e-10!83;UBERON:0009618!1.70e-10!83;UBERON:0007285!1.70e-10!83;UBERON:0000486!5.69e-10!82;UBERON:0000475!1.35e-09!365;UBERON:0002100!8.24e-08!216;UBERON:0002199!1.04e-07!45;UBERON:0002416!1.04e-07!45;UBERON:0000075!3.92e-07!13;UBERON:0005944!3.92e-07!13;UBERON:0004288!3.92e-07!13;UBERON:0003089!3.92e-07!13;UBERON:0002097!4.36e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.59e-09;41!UBERON:0004797;1.74e-07;4!UBERON:0000415;1.74e-07;4!UBERON:0007240;1.74e-07;4!UBERON:0005742;1.74e-07;4!UBERON:0005734;1.74e-07;4!UBERON:0004664;1.74e-07;4!UBERON:0004663;1.74e-07;4!UBERON:0002119;2.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.43e-11,41;UBERON:0002199,1.61e-09,46;UBERON:0002416,1.61e-09,46;UBERON:0000415,2.74e-07,4;UBERON:0007240,2.74e-07,4;UBERON:0005742,2.74e-07,4;UBERON:0005734,2.74e-07,4;UBERON:0004664,2.74e-07,4;UBERON:0004663,2.74e-07,4;UBERON:0002119,3.26e-07,4 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,0,1.78784437770915,0,0,0,0.261185628199839,1.47440361900905,1.39560233594486,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.816002764977012,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0.973269740605272,0.189069634328136,0,0.702678285545008,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0.563057402416611,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,2.1185468930115,2.86836620748814,1.06400514659507,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0,0,0.149448680551801,1.64408298101271,1.13311061057692,1.54495887372473,0.408308342509787,0.491337269247072,0.309977343527296,1.18800285728205,0.989067717114227,0,0.718618141816238,0.336672227908132,0.750711119231785,0.554128230968366,0.438977620880838,0.30648779579902,1.20190447125277,0,9.50765069150968,0.427114777637135,0.635795703478686,4.50136644126603,1.03052529238439,3.34932702059318,0.18611685633159,3.37552664482532,1.26668106709558,8.33031455005578,0.460249493211497,0,2.13005755509969,1.30977727695932,0,0.57978255948989,4.09119180886252,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.603173834469785,0.370353780634118,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,1.00789276919316,0.425325291727159,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0.579125226670317,2.26023954805422,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,1.08506009479894,0,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,2.65690239414175,2.94990669666725,0.260650843404249,0,0,0,0,0,0,0,0,0,3.52962538562544,1.12264037773229,0.512556597022804,0,1.60853921143608,1.48418066444991,0.925258162815933,0.887808626565635,0.492762936082855,0.519254429183621,0.581051892299796,0,1.60405176242628,0,0.114814448164607,0,0.786746489756545,0,0.15403067420883,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,1.72279661398852,0,1.6068392984416,0,0.308097234229289,0.460511024178389,0.413509717453592,0.214840489736547,0,0.426133137080504,0.0890320356467374,0.165284915360978,0.768760269460425,13.2717220994367,0.10115778085555,0.464845549297286,1.88887408098384,0,0,0,0.869932992075073,0,0.715624433709956,0,0.316379424718726,0.762520775695299,0,0,0.636406495851874,3.92474320099615,0.359744915166629,0,0.589062011728432,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,2.92456187557541,0,0.409499734223957,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0.563391205064483,0,0,0.35667105148125,0,0,0.987884678879706,0,0,0.577332676353072,0.670302275535787,1.08890984861323,0.282431402330337,0.86101074534246,1.68471475667626,0.886860307073351,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0.197286811273867,0,3.33410970433911,0,0.0927680981618513,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.274083849293502,0.993573058514948,0,0,0,0,0,0,0,0,0,0,0,1.35904206073614,1.04602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.157363764404994,1.37280437475228,0,0.191915197319445,0,0.662091970365432,0,0,0,1.30634944043764,0,0,1.19271615249795,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.332787154610557,0,0,0.624902039810533,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.757612021100357,0,0.889811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0.295710299979268,1.43367090447332,0,1.08684069813382,7.05000553329454,2.65841714557995,2.60872530905867,1.6528336989694,2.66563648518157,1.22061219961398,0.727394636810238,0.537052785212442,0.928067519756987,1.59238355479446,1.20008329398946,0.343395705182793,0,0,0,0,0.521988583930423,0,1.15761237161917,0,0,0,0.438568099157414,1.06013487567529,0,0.168942440653073,0,0,0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| ||
|short_description=p9@VEGFC | |short_description=p9@VEGFC | ||
}} | }} |
Latest revision as of 22:39, 16 September 2015
Short description: | p9@VEGFC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_VEGFC_5end |
Coexpression cluster: | NA |
Association with transcript: | -283bp_to_NM_005429, uc003ius.1_5end |
EntrezGene: | VEGFC |
HGNC: | 12682 |
UniProt: | P49767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.39e-16 | 23 |
fibroblast | 4.87e-13 | 76 |
Schwann cell | 9.20e-10 | 2 |
skeletal muscle myoblast | 2.36e-07 | 4 |
fibroblast of tunica adventitia of artery | 2.74e-07 | 4 |
fibroblast of the aortic adventitia | 2.74e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.43e-11 | 41 |
integument | 1.61e-09 | 46 |
integumental system | 1.61e-09 | 46 |
artery wall | 2.74e-07 | 4 |
tunica adventitia of artery | 2.74e-07 | 4 |
adventitia | 2.74e-07 | 4 |
tunica adventitia of blood vessel | 2.74e-07 | 4 |
aorta tunica adventitia | 2.74e-07 | 4 |
aorta wall | 2.74e-07 | 4 |
left ovary | 3.26e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.03e-16 | 14 |
female reproductive organ cancer | 2.19e-07 | 27 |
reproductive organ cancer | 9.23e-07 | 29 |