FFCP PHASE1:Hg19::chr12:64238446..64238535,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:64238446..64238535,+
|short_description=p2@SRGAP1
|description=CAGE_peak_2_at_SRGAP1_5end
|association_with_transcript=-5bp_to_ENST00000357825,NM_020762,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57522 | |EntrezGene=57522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17382 | |HGNC=17382 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6B7 | |UniProt=Q7Z6B7 | ||
|association_with_transcript=-5bp_to_ENST00000357825,NM_020762,uc001srt.2,uc010ssp.1_5end | |||
|cluster_id=chr12:64238446..64238535,+ | |||
|description=CAGE_peak_2_at_SRGAP1_5end | |||
|id=chr12:64238446..64238535,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.74e-17!75;CL:0000055!1.01e-13!180;CL:0002620!5.11e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.30e-11;23!CL:0000057;8.42e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.84e-18,76;CL:0002620,2.40e-11,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.00e-20!365;UBERON:0000468!3.64e-18!659;UBERON:0000467!4.65e-14!625;UBERON:0000480!9.46e-14!626;UBERON:0003102!2.27e-13!95;UBERON:0000481!2.40e-13!347;UBERON:0000062!1.79e-12!511;UBERON:0002050!1.36e-09!605;UBERON:0005423!1.36e-09!605;UBERON:0000923!1.60e-09!604;UBERON:0005291!1.60e-09!604;UBERON:0006598!1.60e-09!604;UBERON:0002532!1.60e-09!604;UBERON:0002199!1.91e-09!45;UBERON:0002416!1.91e-09!45;UBERON:0002097!1.94e-09!40;UBERON:0000922!5.20e-09!612;UBERON:0002100!1.52e-08!216;UBERON:0001007!2.89e-08!155;UBERON:0001555!2.89e-08!155;UBERON:0007026!2.89e-08!155;UBERON:0000160!1.91e-07!27;UBERON:0004119!2.24e-07!169;UBERON:0000925!2.24e-07!169;UBERON:0006595!2.24e-07!169;UBERON:0003104!5.42e-07!238;UBERON:0009142!5.42e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.42e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,7.47e-12,99;UBERON:0002199,2.59e-09,46;UBERON:0002416,2.59e-09,46;UBERON:0002097,2.85e-09,41 | |||
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| ||
|short_description=p2@SRGAP1 | |||
}} | }} |
Latest revision as of 19:56, 19 September 2015
Short description: | p2@SRGAP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000357825, NM_020762, uc001srt.2, uc010ssp.1_5end |
EntrezGene: | SRGAP1 |
HGNC: | 17382 |
UniProt: | Q7Z6B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 2.84e-18 | 76 |
skin fibroblast | 2.40e-11 | 23 |
Ontology term | p-value | n |
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surface structure | 7.47e-12 | 99 |
integument | 2.59e-09 | 46 |
integumental system | 2.59e-09 | 46 |
skin of body | 2.85e-09 | 41 |