FFCP PHASE1:Hg19::chr12:71533087..71533101,-: Difference between revisions
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|id=chr12:71533087..71533101,-
|short_description=p14@TSPAN8
|description=CAGE_peak_14_at_TSPAN8_5end
|association_with_transcript=-32bp_to_ENST00000552128_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWH2 | |UniProt=F8VWH2 | ||
|association_with_transcript=-32bp_to_ENST00000552128_5end | |||
|cluster_id=chr12:71533087..71533101,- | |||
|description=CAGE_peak_14_at_TSPAN8_5end | |||
|id=chr12:71533087..71533101,- | |||
|ontology_enrichment_celltype=CL:0000181!2.40e-09!12;CL:0000417!2.40e-09!12;CL:0000668!2.40e-09!12;CL:0000414!2.40e-09!12;CL:0000412!2.40e-09!12;CL:0000182!2.40e-09!12;CL:0000313!1.52e-08!1;CL:0000223!4.45e-08!59;CL:0002563!6.04e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000313;7.62e-26;1!CL:0000159;1.21e-13;2!CL:0002231;1.53e-09;3!CL:0002563;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.79e-26,1;CL:0000159,1.37e-13,2;CL:0002231,1.54e-09,3;CL:0002563,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.20e-15!2;DOID:299!1.21e-09!25;DOID:2152!1.52e-08!1;DOID:3119!5.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;7.62e-26;1!DOID:3493;6.43e-14;2!DOID:299;1.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.79e-26,1;DOID:3493,6.43e-14,2;DOID:299,1.17e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.73e-18!27;UBERON:0005409!1.95e-17!35;UBERON:0009497!1.13e-16!25;UBERON:0000015!1.13e-16!25;UBERON:0002423!1.13e-16!25;UBERON:0006235!1.13e-16!25;UBERON:0004161!1.13e-16!25;UBERON:0000059!1.49e-15!11;UBERON:0004921!1.97e-15!129;UBERON:0004185!1.97e-15!129;UBERON:0008835!1.19e-14!22;UBERON:0003894!1.19e-14!22;UBERON:0009854!5.61e-14!23;UBERON:0001007!8.01e-14!155;UBERON:0001555!8.01e-14!155;UBERON:0007026!8.01e-14!155;UBERON:0003929!1.18e-13!54;UBERON:0007499!8.55e-13!25;UBERON:0002107!1.16e-12!19;UBERON:0006925!1.16e-12!19;UBERON:0008836!1.16e-12!19;UBERON:0001155!1.45e-12!9;UBERON:0004119!2.30e-12!169;UBERON:0000925!2.30e-12!169;UBERON:0006595!2.30e-12!169;UBERON:0009856!2.85e-12!26;UBERON:0005057!4.09e-09!26;UBERON:0004911!1.52e-08!1;UBERON:0005911!2.49e-08!82;UBERON:0001242!6.04e-08!4;UBERON:0001262!6.04e-08!4;UBERON:0004786!6.04e-08!4;UBERON:0004808!6.04e-08!4;UBERON:0001277!6.04e-08!4;UBERON:0001052!1.08e-07!4;UBERON:0000077!1.09e-07!130;UBERON:0002365!1.47e-07!31;UBERON:0002330!1.47e-07!31;UBERON:0005172!5.95e-07!55;UBERON:0005173!5.95e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;7.62e-26;1!UBERON:0004909;1.21e-13;2!UBERON:0000160;5.25e-13;17!UBERON:0001155;6.16e-12;9!UBERON:0005409;2.49e-10;22!UBERON:0000059;6.06e-10;11!UBERON:0001242;1.80e-07;4!UBERON:0001262;1.80e-07;4!UBERON:0004786;1.80e-07;4!UBERON:0004808;1.80e-07;4!UBERON:0001277;1.80e-07;4!UBERON:0004921;2.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.79e-26,1;UBERON:0004909,1.37e-13,2;UBERON:0000160,5.04e-13,17;UBERON:0001155,6.16e-12,9;UBERON:0000059,6.06e-10,11;UBERON:0005409,3.16e-09,25;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4 | |||
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|short_description=p14@TSPAN8 | |||
}} | }} |
Latest revision as of 16:35, 24 September 2015
Short description: | p14@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TSPAN8_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000552128_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | F8VWH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.79e-26 | 1 |
seromucus secreting cell | 1.37e-13 | 2 |
epithelial cell of prostate | 1.54e-09 | 3 |
intestinal epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.79e-26 | 1 |
epithelium of gonad | 1.37e-13 | 2 |
intestine | 5.04e-13 | 17 |
colon | 6.16e-12 | 9 |
large intestine | 6.06e-10 | 11 |
gastrointestinal system | 3.16e-09 | 25 |
intestinal mucosa | 1.69e-07 | 4 |
wall of intestine | 1.69e-07 | 4 |
gastrointestinal system mucosa | 1.69e-07 | 4 |
gastrointestinal system epithelium | 1.69e-07 | 4 |
intestinal epithelium | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.79e-26 | 1 |
signet ring cell adenocarcinoma | 6.43e-14 | 2 |
adenocarcinoma | 1.17e-09 | 25 |