FFCP PHASE1:Hg19::chr1:28503693..28503698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=0bp_to_ENST00000373857_5end | |association_with_transcript=0bp_to_ENST00000373857_5end | ||
|cluster_id=chr1:28503693..28503698,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_17_at_PTAFR_5end | |description=CAGE_peak_17_at_PTAFR_5end | ||
|id=chr1:28503693..28503698,- | |id=chr1:28503693..28503698,- | ||
|ontology_enrichment_celltype=CL:0000945!5.11e-12!24;CL:0000826!5.11e-12!24;CL:0002274!6.22e-12!5;CL:0000457!6.22e-12!5;CL:0002191!6.22e-12!5;CL:0000097!6.22e-12!5;CL:0000831!6.22e-12!5;CL:0002028!6.22e-12!5;CL:0002032!6.51e-12!165;CL:0000837!6.51e-12!165;CL:0000988!1.11e-11!182;CL:0000037!2.96e-11!172;CL:0000566!2.96e-11!172;CL:0002031!4.72e-08!124;CL:0000763!1.11e-07!112;CL:0000049!1.11e-07!112;CL:0000946!1.61e-07!1;CL:0000786!1.61e-07!1;CL:0000980!1.61e-07!1;CL:0000163!8.00e-07!9;CL:0000738!8.31e-07!140 | |ontology_enrichment_celltype=CL:0000945!5.11e-12!24;CL:0000826!5.11e-12!24;CL:0002274!6.22e-12!5;CL:0000457!6.22e-12!5;CL:0002191!6.22e-12!5;CL:0000097!6.22e-12!5;CL:0000831!6.22e-12!5;CL:0002028!6.22e-12!5;CL:0002032!6.51e-12!165;CL:0000837!6.51e-12!165;CL:0000988!1.11e-11!182;CL:0000037!2.96e-11!172;CL:0000566!2.96e-11!172;CL:0002031!4.72e-08!124;CL:0000763!1.11e-07!112;CL:0000049!1.11e-07!112;CL:0000946!1.61e-07!1;CL:0000786!1.61e-07!1;CL:0000980!1.61e-07!1;CL:0000163!8.00e-07!9;CL:0000738!8.31e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.33e-33;24!CL:0000542;2.60e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.33e-33,24;CL:0000826,1.33e-33,24;CL:0000838,4.67e-16,52;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.60e-07;53 | |||
|ontology_enrichment_disease=DOID:2355!8.00e-08!1 | |ontology_enrichment_disease=DOID:2355!8.00e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:2355;6.58e-50;1!DOID:74;9.18e-26;2!DOID:1287;1.29e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,6.58e-50,1;DOID:74,9.18e-26,2;DOID:1287,1.29e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0002110!5.29e-09!3;UBERON:0006242!5.29e-09!3;UBERON:0002079!9.71e-08!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p17@PTAFR | |short_description=p17@PTAFR | ||
}} | }} |
Latest revision as of 09:59, 17 September 2015
Short description: | p17@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 0bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.33e-33 | 24 |
pro-B cell | 1.33e-33 | 24 |
lymphoid lineage restricted progenitor cell | 4.67e-16 | 52 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
anemia | 6.58e-50 | 1 |
hematopoietic system disease | 9.18e-26 | 2 |
cardiovascular system disease | 1.29e-13 | 4 |