FFCP PHASE1:Hg19::chr5:59064588..59064605,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000507116_5end | |association_with_transcript=-117bp_to_ENST00000507116_5end | ||
|cluster_id=chr5:59064588..59064605,- | |||
|description=CAGE_peak_20_at_PDE4D_5end | |description=CAGE_peak_20_at_PDE4D_5end | ||
|id=chr5:59064588..59064605,- | |id=chr5:59064588..59064605,- | ||
|ontology_enrichment_celltype=CL:0000236!1.32e-08!14;CL:0000945!3.06e-07!24;CL:0000826!3.06e-07!24 | |ontology_enrichment_celltype=CL:0000236!1.32e-08!14;CL:0000945!3.06e-07!24;CL:0000826!3.06e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.01e-13;13!CL:0000945;2.01e-09;24!CL:0000064;9.53e-07;3!CL:0000067;9.53e-07;3!CL:0005012;9.53e-07;3!CL:0002304;9.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.32e-12,14;CL:0000945,2.16e-09,24;CL:0000826,2.16e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.30e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;9.53e-07;3!UBERON:0001775;9.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,6.86e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.89791704751465,0.791300934685361,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,2.40148321798935,1.13735385989937,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,1.77901850772711,3.84057200309856,0.800791974072025,3.4485146397269,0.661044872784862,0.954053754535364,12.5226853204079,8.22132065119314,8.79228424688026,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,2.60737813306872,0.473447805734733,1.94826728407911,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.579606171470105,0.593146252648242,0,1.04535523804977,0,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.10864698731282,1.40535657109002,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0,1.55050055501597,0.35576626268671,2.34304428935269,0.402829317109147,1.52054421143703,0,0,0,0.803697554556718,0.44905874525234,0.900891843866578,0,0,0.732806975721629,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,1.21085942115945,0.576175924479999,0,0,0,0,0.117434498643765,0,0.421352420106746,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.709840800239063,1.01150814046861,0.482022059766964,1.54411561825352,0.435758888184812,1.18635309555548,1.48314438976181,0.784885860501384,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0.317489471460845,0,2.34434894420094,0,0.616964956219941,0.300343057843917,1.71495859578347,0,0.87192013766656,0,1.16344544182,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.670065061337395,0,2.24702107184155,0,2.07207756718018,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,2.27466768141793,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.41254749960294,0,0.650060246036521,0,0,0,0,0.413509717453592,0,0.290033387828457,0.255679882248303,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96558024679421,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0.23874448473769,1.78178808499583,0.307160702099232,0,0.422008249231538,1.00177834520615,0,0,0.398495976502139,0.552567831062295,3.27512572210559,0.715880777515084,0,0,0.0898683511473268,1.43216939740487,0,0.690503839458535,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0,0.762760950878299,0.236387681767936,0.344743373241465,0.291604613383254,1.21537496453305,0,0.120596438625408,0,0.221158519862449,0,0,4.24860007724062,0.278847488557207,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87193422942574,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,1.094728735294,0.19566461893209,0,1.97292201424695,0,3.0607276163049,0.063186579628488,0.901940516486955,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,1.45134496933628,2.92357268344742,1.14961639874493,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0.0633107959558787,0.391102765469606,0.240476460754601,0.213452994739353,0.599428828746391,0.432271251462318,0,0.514784993585894,0.288109595976299,0,5.42096279618629,1.22313785466253,0.941425616810999,0,0,1.80126086612937,0.410716136675979,0,0,0.262887354279314,0,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0.268733889946905,0,0,0,0.0824158583811665,0,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.472091293214983,0.422401346077626,0.537862017998534,0,0,0,0,0,0,0,0,0,0.340776043570843,1.01980882368113,0,0,0,0.13223260174269,1.88195521672762,0.704815022316672,0.106787412567695,1.10043013569766,0,0,0,0.243585196761792,0,0,0,0,0.327872630709804,2.51286554000375,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,4.15045904808692,0.499921631848426,0.758245587708239,1.42732666772484,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.601030435988874,0,0.406870733204662,0,0.751873899297419,0,0.398095888698616,0,0,0,0,0.57785949122191,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0,0,0,0,0.314531883711793,0.218419276384028,0.169732529954025,1.91317428091515,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0,3.52900374710405,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.353909170043221,0,0.346576998451015,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,1.64092442705466,0.548257766857182,1.98484471355718,2.98981115411355,0.255524855279191,0,0,0.606965604236632,0.91064876540519,0.354809480650555,0.115233987555779,1.02892805662451,0.0679697329768317,0.0657727735628491,0,0.667388411352415,1.0989032999072,0,0.560544326627578,0.913158720509496,0,4.7775168788705,1.07214816264985,0,0.464965701472501,0.521574816907738,0,0.62164849248911,1.53646629384555,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,2.79185747097888,2.8666168169323,0,0.098150233615243,0.487671699929078,0,0,0,0.485710993059139,2.10545517115895,0.994753875806841,0.475680363110274,3.04954421505192,0.879524133963433,1.81155412280008,0.231522474323834,0.437119121007915,3.76253837089218,2.45148321753905,2.59244201811789,0,0.594092800654172,1.2679671827502,0,0.281951753939561,0.515663103788617,1.09935271517422,0,0,0.561689566824178,0,0,0.143339583151451,4.57537530360235,0,1.30905207102113,0.5290268405154,0,0,0,1.51399709802095,0.546327859818478,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.426467963801962,1.42838658878244,0,0.124149428591716,0,0,0.404234377916439,0,0.342233301085281,1.21233695426258,0.78894425931944,0.99798106963804,1.70946864083046,0.106727345877715,0,1.16772762738563,2.34640942403454,2.07810455110873,1.22068853494722,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,5.89791704751465,0.791300934685361,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,0.369363174230364,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0.382067028739756,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,2.40148321798935,1.13735385989937,0,0,0,0.217010870715852,0,0,0,0.436194716338694,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,1.77901850772711,3.84057200309856,0.800791974072025,3.4485146397269,0.661044872784862,0.954053754535364,12.5226853204079,8.22132065119314,8.79228424688026,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,2.60737813306872,0.473447805734733,1.94826728407911,0.222820913770347,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0.579606171470105,0.593146252648242,0,1.04535523804977,0,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,1.10864698731282,1.40535657109002,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0,1.55050055501597,0.35576626268671,2.34304428935269,0.402829317109147,1.52054421143703,0,0,0,0.803697554556718,0.44905874525234,0.900891843866578,0,0,0.732806975721629,2.63560834872127,7.75560528296651,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,1.21085942115945,0.576175924479999,0,0,0,0,0.117434498643765,0,0.421352420106746,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.709840800239063,1.01150814046861,0.482022059766964,1.54411561825352,0.435758888184812,1.18635309555548,1.48314438976181,0.784885860501384,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0.53735113621709,0,0,0,0,0,0,0,0.317489471460845,0,2.34434894420094,0,0.616964956219941,0.300343057843917,1.71495859578347,0,0.87192013766656,0,1.16344544182,0,0,0,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.670065061337395,0,2.24702107184155,0,2.07207756718018,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.213455115606889,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,2.27466768141793,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.41254749960294,0,0.650060246036521,0,0,0,0,0.413509717453592,0,0.290033387828457,0.255679882248303,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0.848432591722276,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96558024679421,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0.23874448473769,1.78178808499583,0.307160702099232,0,0.422008249231538,1.00177834520615,0,0,0.398495976502139,0.552567831062295,3.27512572210559,0.715880777515084,0,0,0.0898683511473268,1.43216939740487,0,0.690503839458535,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0,0,0,0.762760950878299,0.236387681767936,0.344743373241465,0.291604613383254,1.21537496453305,0,0.120596438625408,0,0.221158519862449,0,0,4.24860007724062,0.278847488557207,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87193422942574,0.995261931078505,1.32686346755009,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,1.094728735294,0.19566461893209,0,1.97292201424695,0,3.0607276163049,0.063186579628488,0.901940516486955,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0.34945333648406,0,1.45134496933628,2.92357268344742,1.14961639874493,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.19871461170299,0.0633107959558787,0.391102765469606,0.240476460754601,0.213452994739353,0.599428828746391,0.432271251462318,0,0.514784993585894,0.288109595976299,0,5.42096279618629,1.22313785466253,0.941425616810999,0,0,1.80126086612937,0.410716136675979,0,0,0.262887354279314,0,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0.268733889946905,0,0,0,0.0824158583811665,0,0.78741985211799,0,0,0.136203406111576,0.160753148465019,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,0.0788057072991982,0.472091293214983,0.422401346077626,0.537862017998534,0,0,0,0,0,0,0,0,0,0.340776043570843,1.01980882368113,0,0,0,0.13223260174269,1.88195521672762,0.704815022316672,0.106787412567695,1.10043013569766,0,0,0,0.243585196761792,0,0,0,0,0.327872630709804,2.51286554000375,0,0,0.250381861413,0,0.221858103073705,0.310482014706917,4.15045904808692,0.499921631848426,0.758245587708239,1.42732666772484,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.601030435988874,0,0.406870733204662,0,0.751873899297419,0,0.398095888698616,0,0,0,0,0.57785949122191,0,0,0.226705925512272,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0,0,0,0,0.314531883711793,0.218419276384028,0.169732529954025,1.91317428091515,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0,3.52900374710405,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.353909170043221,0,0.346576998451015,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,1.64092442705466,0.548257766857182,1.98484471355718,2.98981115411355,0.255524855279191,0,0,0.606965604236632,0.91064876540519,0.354809480650555,0.115233987555779,1.02892805662451,0.0679697329768317,0.0657727735628491,0,0.667388411352415,1.0989032999072,0,0.560544326627578,0.913158720509496,0,4.7775168788705,1.07214816264985,0,0.464965701472501,0.521574816907738,0,0.62164849248911,1.53646629384555,0,0,0.118332000730565,0.170426809518315,0.423387050190929,0,2.79185747097888,2.8666168169323,0,0.098150233615243,0.487671699929078,0,0,0,0.485710993059139,2.10545517115895,0.994753875806841,0.475680363110274,3.04954421505192,0.879524133963433,1.81155412280008,0.231522474323834,0.437119121007915,3.76253837089218,2.45148321753905,2.59244201811789,0,0.594092800654172,1.2679671827502,0,0.281951753939561,0.515663103788617,1.09935271517422,0,0,0.561689566824178,0,0,0.143339583151451,4.57537530360235,0,1.30905207102113,0.5290268405154,0,0,0,1.51399709802095,0.546327859818478,0,0,0,0.0918948995348449,0,0,0,0,0.103432995861895,0.426467963801962,1.42838658878244,0,0.124149428591716,0,0,0.404234377916439,0,0.342233301085281,1.21233695426258,0.78894425931944,0.99798106963804,1.70946864083046,0.106727345877715,0,1.16772762738563,2.34640942403454,2.07810455110873,1.22068853494722,0,0.402547587182052,0 | ||
|short_description=p20@PDE4D | |short_description=p20@PDE4D | ||
}} | }} |
Latest revision as of 07:57, 18 September 2015
Short description: | p20@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_ENST00000507116_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.32e-12 | 14 |
lymphocyte of B lineage | 2.16e-09 | 24 |
pro-B cell | 2.16e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 6.86e-07 | 22 |