FFCP PHASE1:Hg19::chr5:61213156..61213165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:61213156..61213165,- | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr5:61213156..61213165,- | |description=CAGE_peak_at_chr5:61213156..61213165,- | ||
|id=chr5:61213156..61213165,- | |id=chr5:61213156..61213165,- | ||
|ontology_enrichment_celltype=CL:0002368!2.06e-29!13;CL:0002076!2.16e-21!43;CL:0002166!3.53e-19!3;CL:0000066!1.08e-17!254;CL:0002202!5.21e-17!9;CL:0002632!5.21e-17!9;CL:0002159!9.99e-17!13;CL:0000244!5.45e-15!4;CL:0000731!5.45e-15!4;CL:0000223!6.79e-15!59;CL:0002327!1.20e-14!4;CL:0000240!1.11e-09!6;CL:0000311!1.11e-09!6;CL:0000079!1.11e-09!6;CL:0000237!1.11e-09!6;CL:0000036!1.11e-09!6;CL:0000357!1.11e-09!6;CL:0000114!1.11e-09!6;CL:0002328!2.75e-09!3;CL:0000068!2.99e-09!3;CL:0000069!2.99e-09!3;CL:0000307!2.99e-09!3;CL:0000377!2.99e-09!3;CL:0002621!3.38e-09!3;CL:0000362!1.38e-07!8;CL:0002336!4.61e-07!1;CL:0002261!4.61e-07!1;CL:0002170!4.61e-07!1 | |ontology_enrichment_celltype=CL:0002368!2.06e-29!13;CL:0002076!2.16e-21!43;CL:0002166!3.53e-19!3;CL:0000066!1.08e-17!254;CL:0002202!5.21e-17!9;CL:0002632!5.21e-17!9;CL:0002159!9.99e-17!13;CL:0000244!5.45e-15!4;CL:0000731!5.45e-15!4;CL:0000223!6.79e-15!59;CL:0002327!1.20e-14!4;CL:0000240!1.11e-09!6;CL:0000311!1.11e-09!6;CL:0000079!1.11e-09!6;CL:0000237!1.11e-09!6;CL:0000036!1.11e-09!6;CL:0000357!1.11e-09!6;CL:0000114!1.11e-09!6;CL:0002328!2.75e-09!3;CL:0000068!2.99e-09!3;CL:0000069!2.99e-09!3;CL:0000307!2.99e-09!3;CL:0000377!2.99e-09!3;CL:0002621!3.38e-09!3;CL:0000362!1.38e-07!8;CL:0002336!4.61e-07!1;CL:0002261!4.61e-07!1;CL:0002170!4.61e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000244;7.07e-34;4!CL:0000731;7.07e-34;4!CL:0002368;1.56e-23;13!CL:0002202;1.31e-15;9!CL:0002632;1.31e-15;9!CL:0002328;2.74e-12;3!CL:0002166;2.74e-12;3!CL:0000307;2.74e-12;3!CL:0002076;7.49e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.07e-34,4;CL:0000731,7.07e-34,4;CL:0002368,1.75e-23,13;CL:0002202,1.52e-15,9;CL:0002632,1.52e-15,9;CL:0002166,2.31e-12,3;CL:0002328,2.89e-12,3;CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3;CL:0002076,8.32e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000377;2.74e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!1.20e-14!4;UBERON:0005333!1.20e-14!4;UBERON:0008425!1.20e-14!4;UBERON:0005311!1.20e-14!4;UBERON:0001708!1.59e-14!4;UBERON:0001704!1.59e-14!4;UBERON:0000365!4.30e-12!5;UBERON:0005153!8.49e-12!37;UBERON:0007196!7.30e-11!14;UBERON:0001558!7.30e-11!14;UBERON:0005910!3.72e-10!6;UBERON:0002090!7.50e-10!6;UBERON:0004815!2.75e-09!3;UBERON:0002031!2.75e-09!3;UBERON:0001949!3.38e-09!3;UBERON:0004119!5.58e-09!169;UBERON:0000925!5.58e-09!169;UBERON:0006595!5.58e-09!169;UBERON:0005911!2.24e-08!82;UBERON:0001004!2.55e-08!72;UBERON:0005157!3.65e-08!51;UBERON:0006554!1.05e-07!44;UBERON:0000076!1.48e-07!8;UBERON:0001008!1.66e-07!45;UBERON:0002185!3.63e-07!4;UBERON:0002530!8.30e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.38e-27;5!UBERON:0005910;5.43e-23;6!UBERON:0004815;2.74e-12;3!UBERON:0002031;2.74e-12;3!UBERON:0000486;4.80e-12;12!UBERON:0007196;8.85e-10;15!UBERON:0001558;8.85e-10;15!UBERON:0001708;1.50e-09;4!UBERON:0008895;1.50e-09;4!UBERON:0011159;6.78e-08;5!UBERON:0002185;6.78e-08;5!UBERON:0000065;2.24e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.38e-27,5;UBERON:0005910,5.43e-23,6;UBERON:0004815,2.89e-12,3;UBERON:0002031,2.89e-12,3;UBERON:0007196,9.66e-10,15;UBERON:0001558,9.66e-10,15;UBERON:0001708,1.32e-09,4;UBERON:0008895,1.32e-09,4;UBERON:0011159,6.13e-08,5;UBERON:0002185,7.01e-08,5;UBERON:0010188,8.02e-07,6;UBERON:0002539,8.02e-07,6;UBERON:0008816,8.02e-07,6 | |||
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|short_description=p@chr5:61213156..61213165,- | |short_description=p@chr5:61213156..61213165,- | ||
}} | }} |
Latest revision as of 15:38, 30 July 2015
Short description: | p@chr5:61213156..61213165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:61213156..61213165, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.07e-34 | 4 |
urothelial cell | 7.07e-34 | 4 |
respiratory epithelial cell | 1.75e-23 | 13 |
epithelial cell of tracheobronchial tree | 1.52e-15 | 9 |
epithelial cell of lower respiratory tract | 1.52e-15 | 9 |
epithelial cell of Malassez | 2.31e-12 | 3 |
bronchial epithelial cell | 2.89e-12 | 3 |
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
endo-epithelial cell | 8.32e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.38e-27 | 5 |
transitional epithelium | 5.43e-23 | 6 |
lower respiratory tract epithelium | 2.89e-12 | 3 |
epithelium of bronchus | 2.89e-12 | 3 |
tracheobronchial tree | 9.66e-10 | 15 |
lower respiratory tract | 9.66e-10 | 15 |
jaw skeleton | 1.32e-09 | 4 |
splanchnocranium | 1.32e-09 | 4 |
primary subdivision of cranial skeletal system | 6.13e-08 | 5 |
bronchus | 7.01e-08 | 5 |
protuberance | 8.02e-07 | 6 |
pharyngeal arch | 8.02e-07 | 6 |
embryonic head | 8.02e-07 | 6 |