FFCP PHASE1:Hg19::chr6:155428151..155428168,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:155428151..155428168,+ | |||
|coexpression_cluster_id=C4576 | |||
|description=CAGE_peak_at_chr6:155428151..155428168,+ | |description=CAGE_peak_at_chr6:155428151..155428168,+ | ||
|id=chr6:155428151..155428168,+ | |id=chr6:155428151..155428168,+ | ||
|ontology_enrichment_celltype=CL:0000062!4.59e-08!11;CL:0000375!4.59e-08!11;CL:0000335!4.59e-08!11;CL:0000153!3.87e-07!9;CL:0000447!3.87e-07!9 | |ontology_enrichment_celltype=CL:0000062!4.59e-08!11;CL:0000375!4.59e-08!11;CL:0000335!4.59e-08!11;CL:0000153!3.87e-07!9;CL:0000447!3.87e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000062;2.92e-13;9!CL:0000138;1.80e-11;6!CL:0000153;8.33e-08;9!CL:0000447;8.33e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.68e-16,11;CL:0000375,1.68e-16,11;CL:0000335,1.68e-16,11;CL:0000058,1.56e-11,6;CL:0000138,1.56e-11,6;CL:0000153,7.59e-08,9;CL:0000447,7.59e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000335;2.00e-16;11!UBERON:0004140;1.91e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;7.28e-09;1!DOID:3369;3.28e-08;1!DOID:4235;3.28e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.56e-09,1;DOID:3369,2.64e-08,1;DOID:4235,3.79e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;7.10e-14;18!UBERON:0004765;1.88e-09;26!UBERON:0007195;3.28e-08;1!UBERON:0000922;7.68e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.07e-08,1 | |||
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| ||
|short_description=p@chr6:155428151..155428168,+ | |short_description=p@chr6:155428151..155428168,+ | ||
}} | }} |
Latest revision as of 21:14, 30 July 2015
Short description: | p@chr6:155428151..155428168, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:155428151..155428168, + |
Coexpression cluster: | C4576_Chondrocyte_Saos2_parietal_immature_epithelioid_occipital_osteosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.68e-16 | 11 |
osteoprogenitor cell | 1.68e-16 | 11 |
mesenchyme condensation cell | 1.68e-16 | 11 |
chondroblast | 1.56e-11 | 6 |
chondrocyte | 1.56e-11 | 6 |
GAG secreting cell | 7.59e-08 | 9 |
carbohydrate secreting cell | 7.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.56e-09 | 1 |
peripheral primitive neuroectodermal tumor | 2.64e-08 | 1 |
spindle cell sarcoma | 3.79e-08 | 1 |