FFCP PHASE1:Hg19::chr13:111805913..111805928,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:111805913..111805928,-
|short_description=p2@BC041861
|description=CAGE_peak_2_at_BC041861_5end
|association_with_transcript=0bp_to_BC041861_5end
|Entrez...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC041861_5end | |||
|cluster_id=chr13:111805913..111805928,- | |||
|description=CAGE_peak_2_at_BC041861_5end | |||
|id=chr13:111805913..111805928,- | |||
|ontology_enrichment_celltype=CL:0002057!9.08e-10!42;CL:0000738!5.58e-09!140;CL:0002087!6.40e-09!119;CL:0000860!6.41e-09!45;CL:0002031!2.64e-08!124;CL:0000037!6.50e-08!172;CL:0000566!6.50e-08!172;CL:0000988!1.16e-07!182;CL:0002032!2.40e-07!165;CL:0000837!2.40e-07!165;CL:0000766!6.03e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000037;2.67e-11;1!CL:0001024;2.67e-11;1!CL:0002591;2.67e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,4.44e-11,1;CL:0002591,4.91e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.67e-07!34;UBERON:0003528!1.67e-07!34;UBERON:0002780!2.07e-07!41;UBERON:0001890!2.07e-07!41;UBERON:0006240!2.07e-07!41;UBERON:0002390!2.54e-07!102;UBERON:0003061!2.54e-07!102;UBERON:0001893!3.05e-07!34;UBERON:0001869!5.00e-07!32;UBERON:0003080!5.03e-07!42;UBERON:0001474!5.97e-07!86;UBERON:0002791!6.57e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,7.26e-09,5;UBERON:0005985,7.26e-09,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0.136874425072884,0.376627918784408,0.0764134057479513,0.164201178899891,0.236132343941038,0.393364276848904,0,0.619264493264304,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,1.17440175733939,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,1.37898272294647,0,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0.56738522469114,1.24564449799115,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.673971786878971,0.300353785683013,0.32145117339416,0.570025487482497,0,0.365328307529268,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0,0,0.977766799900771,0.473447805734733,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0.80642697289893,0,0.868946423296794,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,2.16115474571226,0.364295288292542,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.352303495931295,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0.829312462163088,0.144119953416961,0.50496973370552,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,0.431255149719035,0.898401253958239,0.254094624222463,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0,0.0711418433484141,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.60298219312704,0,0.331737779793674,0,0.219385397153973,0,0,0,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0.19606253431774,0,0,0.476809736941136,0,0,0,0,0,0,0,1.48260564340311,0,0.417687798021821,0.067401132980677,0,0.234264445725339,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.450970258243478,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.696418755514666,0,0.0801588202515337,0,0.39961921916426,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0.0984274815147488,0.338693328263138,0.795229689809303,0.136203406111576,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.332787154610557,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.926404341482917,0.219284049578707,0.176689145945881,0.38582807654183,0,0.256241518587947,0.345430341731199,0.303859956177382,0.553033744606923,0,0.265729680626726,0,0,0.245772908753719,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,0,0.558644917973244,0,0.788617450012533,0,0,0,0.321146125482298,0,0.478901577171454,0.41023272848151,0,0.829887029570615,0.322951291263702,0,0,0.471878893390961,0,0.115525666150338,0,0,0.795664888465099,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.443910671357348,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.118920090777569,0,0,0.301925687133347,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0.352894871715692,0,0,0,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0.250707539292375,3.41004141982077,4.82335434281121,0,0.20686599172379,0,0,0.258355639344024,0.496597714366863,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0.572471974262113,0.136874425072884,0.376627918784408,0.0764134057479513,0.164201178899891,0.236132343941038,0.393364276848904,0,0.619264493264304,0,0,0.369754010166788,0.0774672005803016,0.142169232487422,1.17440175733939,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,1.37898272294647,0,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.580418477257168,0.56738522469114,1.24564449799115,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.673971786878971,0.300353785683013,0.32145117339416,0.570025487482497,0,0.365328307529268,0,0.546138611262131,1.77901850772711,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0,0,0.977766799900771,0.473447805734733,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0,0.821127996921047,0.80642697289893,0,0.868946423296794,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,2.16115474571226,0.364295288292542,0,0,0.174129737299267,0.132957960518865,1.19245312152671,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.352303495931295,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0.246217006087397,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0.829312462163088,0.144119953416961,0.50496973370552,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,0.431255149719035,0.898401253958239,0.254094624222463,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.366277859273374,0.082509499920588,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,1.58510321173008,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0.507447609232169,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0,0.0711418433484141,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.60298219312704,0,0.331737779793674,0,0.219385397153973,0,0,0,0.227884111694002,0,0.179515288819544,0,0,0,0,0,0.31396051279005,0,0,0.19606253431774,0,0,0.476809736941136,0,0,0,0,0,0,0,1.48260564340311,0,0.417687798021821,0.067401132980677,0,0.234264445725339,0.182454789215666,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.450970258243478,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.696418755514666,0,0.0801588202515337,0,0.39961921916426,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0.0984274815147488,0.338693328263138,0.795229689809303,0.136203406111576,0.482259445395058,0.412618309791701,1.66176135211674,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.332787154610557,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0.457680136793847,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0.179088841081487,0.926404341482917,0.219284049578707,0.176689145945881,0.38582807654183,0,0.256241518587947,0.345430341731199,0.303859956177382,0.553033744606923,0,0.265729680626726,0,0,0.245772908753719,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0.107824811396682,0.157265941855896,0.327628914576042,0,0,0,0.558644917973244,0,0.788617450012533,0,0,0,0.321146125482298,0,0.478901577171454,0.41023272848151,0,0.829887029570615,0.322951291263702,0,0,0.471878893390961,0,0.115525666150338,0,0,0.795664888465099,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.443910671357348,0.546974809018219,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0.135939465953663,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0.118920090777569,0,0,0.301925687133347,0,0,0,0.490296643507811,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0.352894871715692,0,0,0,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0.250707539292375,3.41004141982077,4.82335434281121,0,0.20686599172379,0,0,0.258355639344024,0.496597714366863,0.112131862580613,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p2@BC041861 | |||
}} | }} |
Latest revision as of 14:37, 24 July 2015
Short description: | p2@BC041861 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC041861_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC041861_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 4.44e-11 | 1 |
smooth muscle cell of the pulmonary artery | 4.91e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 7.26e-09 | 5 |
coronary vessel | 7.26e-09 | 5 |