FFCP PHASE1:Hg19::chr20:57875506..57875525,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=P14138,Q7Z6D2,Q4FAT2 | |UniProt=P14138,Q7Z6D2,Q4FAT2 | ||
|association_with_transcript=7bp_to_ENST00000371028,NM_000114,NM_207032,NM_207033,NM_207034,uc002yao.1,uc002yap.2,uc002yaq.2,uc002yar.2,uc002yas.2_5end | |association_with_transcript=7bp_to_ENST00000371028,NM_000114,NM_207032,NM_207033,NM_207034,uc002yao.1,uc002yap.2,uc002yaq.2,uc002yar.2,uc002yas.2_5end | ||
|cluster_id=chr20:57875506..57875525,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_5_at_EDN3_5end | |description=CAGE_peak_5_at_EDN3_5end | ||
|id=chr20:57875506..57875525,+ | |id=chr20:57875506..57875525,+ | ||
|ontology_enrichment_celltype=CL:0002536!2.07e-07!2 | |ontology_enrichment_celltype=CL:0002536!2.07e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002577;1.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.05e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.91e-19;1!UBERON:0006298;3.91e-19;1!UBERON:0003056;1.99e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.99e-34!115;UBERON:0001049!6.03e-26!57;UBERON:0005068!6.03e-26!57;UBERON:0006241!6.03e-26!57;UBERON:0007135!6.03e-26!57;UBERON:0002616!1.52e-22!59;UBERON:0003075!6.53e-20!86;UBERON:0007284!6.53e-20!86;UBERON:0005743!1.33e-19!86;UBERON:0001017!4.95e-19!82;UBERON:0002346!1.02e-18!90;UBERON:0000955!4.42e-18!69;UBERON:0006238!4.42e-18!69;UBERON:0000073!4.13e-17!94;UBERON:0001016!4.13e-17!94;UBERON:0002780!2.38e-16!41;UBERON:0001890!2.38e-16!41;UBERON:0006240!2.38e-16!41;UBERON:0003080!7.15e-16!42;UBERON:0001893!1.65e-15!34;UBERON:0000153!1.73e-15!129;UBERON:0007811!1.73e-15!129;UBERON:0002020!1.94e-15!34;UBERON:0003528!1.94e-15!34;UBERON:0000033!2.38e-15!123;UBERON:0001950!8.63e-15!20;UBERON:0001869!2.17e-14!32;UBERON:0002791!8.12e-14!33;UBERON:0002619!2.67e-13!22;UBERON:0002298!3.29e-13!8;UBERON:0004121!8.93e-13!169;UBERON:0000924!2.73e-12!173;UBERON:0006601!2.73e-12!173;UBERON:0003076!6.29e-12!15;UBERON:0003057!6.29e-12!15;UBERON:0004733!1.39e-11!12;UBERON:0002028!1.39e-11!12;UBERON:0007277!1.39e-11!12;UBERON:0000956!1.69e-11!25;UBERON:0000203!1.69e-11!25;UBERON:0003056!2.98e-11!61;UBERON:0004732!1.31e-10!13;UBERON:0000064!1.80e-10!219;UBERON:0001896!6.40e-10!3;UBERON:0005290!6.40e-10!3;UBERON:0010096!6.40e-10!3;UBERON:0002021!1.20e-09!5;UBERON:0000988!1.25e-09!3;UBERON:0000481!1.80e-09!347;UBERON:0000062!5.14e-09!511;UBERON:0001829!9.90e-08!2;UBERON:0000477!1.15e-07!286;UBERON:0004089!1.88e-07!2;UBERON:0000007!2.66e-07!2;UBERON:0004111!3.23e-07!241;UBERON:0002360!6.90e-07!2;UBERON:0000094!6.90e-07!2;UBERON:0007645!6.90e-07!2;UBERON:0000922!7.03e-07!612;UBERON:0002148!7.56e-07!2;UBERON:0009662!7.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;3.91e-19;1!UBERON:0001044;7.33e-13;6!UBERON:0003293;7.33e-13;6!UBERON:0003294;7.33e-13;6!UBERON:0010047;7.33e-13;6!UBERON:0003408;7.33e-13;6!UBERON:0000167;7.33e-13;6!UBERON:0001041;4.17e-12;14!UBERON:0004921;5.68e-12;33!UBERON:0001829;2.99e-10;2!UBERON:0001043;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,3.25e-19,1;UBERON:0006298,3.25e-19,1;UBERON:0001044,6.12e-13,6;UBERON:0003293,6.12e-13,6;UBERON:0003294,6.12e-13,6;UBERON:0010047,6.12e-13,6;UBERON:0000167,6.12e-13,6;UBERON:0001829,2.72e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0003408,3.90e-08,10;UBERON:0001043,2.97e-07,3;UBERON:0009143,2.97e-07,3 | |||
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| ||
|short_description=p5@EDN3 | |short_description=p5@EDN3 | ||
}} | }} |
Latest revision as of 07:36, 17 September 2015
Short description: | p5@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EDN3_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 7bp_to_ENST00000371028, NM_000114, NM_207032, NM_207033, NM_207034, uc002yao.1, uc002yap.2, uc002yaq.2, uc002yar.2, uc002yas.2_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | P14138Q7Z6D2Q4FAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 3.25e-19 | 1 |
submandibular gland primordium | 3.25e-19 | 1 |
saliva-secreting gland | 6.12e-13 | 6 |
gland of oral region | 6.12e-13 | 6 |
gland of foregut | 6.12e-13 | 6 |
oral gland | 6.12e-13 | 6 |
oral cavity | 6.12e-13 | 6 |
major salivary gland | 2.72e-10 | 2 |
adult organism | 1.21e-09 | 114 |
gland of gut | 3.90e-08 | 10 |
esophagus | 2.97e-07 | 3 |
esophageal region | 2.97e-07 | 3 |