FFCP PHASE1:Hg19::chr21:29911657..29911665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118421 | |EntrezGene=118421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17138 | |HGNC=17138 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000412526,ENST00000455939,NR_026552,NR_026553,uc002ymm.2,uc002ymn.2_5end | |association_with_transcript=17bp_to_ENST00000412526,ENST00000455939,NR_026552,NR_026553,uc002ymm.2,uc002ymn.2_5end | ||
|cluster_id=chr21:29911657..29911665,+ | |||
|description=CAGE_peak_2_at_LINC00161_5end | |description=CAGE_peak_2_at_LINC00161_5end | ||
|id=chr21:29911657..29911665,+ | |id=chr21:29911657..29911665,+ | ||
|ontology_enrichment_celltype=CL:0000359!7.59e-15!32;CL:0002596!3.28e-14!2;CL:0000192!5.85e-11!42;CL:0000514!5.85e-11!42;CL:0000055!8.15e-10!180;CL:0000680!1.55e-09!57;CL:0000056!1.55e-09!57;CL:0000355!1.55e-09!57;CL:0002579!4.01e-09!3;CL:0000187!3.37e-08!54;CL:0000183!2.22e-07!59;CL:0000393!3.11e-07!60;CL:0000211!3.11e-07!60;CL:0000569!3.95e-07!4;CL:0000011!3.95e-07!4;CL:0000153!7.89e-07!9;CL:0000447!7.89e-07!9 | |ontology_enrichment_celltype=CL:0000359!7.59e-15!32;CL:0002596!3.28e-14!2;CL:0000192!5.85e-11!42;CL:0000514!5.85e-11!42;CL:0000055!8.15e-10!180;CL:0000680!1.55e-09!57;CL:0000056!1.55e-09!57;CL:0000355!1.55e-09!57;CL:0002579!4.01e-09!3;CL:0000187!3.37e-08!54;CL:0000183!2.22e-07!59;CL:0000393!3.11e-07!60;CL:0000211!3.11e-07!60;CL:0000569!3.95e-07!4;CL:0000011!3.95e-07!4;CL:0000153!7.89e-07!9;CL:0000447!7.89e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.48e-40;5!CL:0000192;4.53e-08;43!CL:0000359;2.32e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.48e-40,5;CL:0000359,1.18e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;4.53e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!2.49e-14!33;UBERON:0004571!2.49e-14!33;UBERON:0005396!3.28e-14!2;UBERON:0001637!1.66e-13!42;UBERON:0003509!1.66e-13!42;UBERON:0004572!1.66e-13!42;UBERON:0004872!6.45e-12!84;UBERON:0001981!8.59e-11!60;UBERON:0007500!8.59e-11!60;UBERON:0004537!8.59e-11!60;UBERON:0006965!8.59e-11!60;UBERON:0000055!4.00e-09!69;UBERON:0001134!8.52e-09!61;UBERON:0002036!8.52e-09!61;UBERON:0003082!8.52e-09!61;UBERON:0002385!1.84e-08!63;UBERON:0001015!1.84e-08!63;UBERON:0000383!1.84e-08!63;UBERON:0004535!1.87e-08!110;UBERON:0001009!3.70e-08!113;UBERON:0002049!1.01e-07!79;UBERON:0007798!1.01e-07!79;UBERON:0003914!1.07e-07!118;UBERON:0004290!1.92e-07!70;UBERON:0000486!2.02e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.48e-40;5!UBERON:0001533;1.48e-40;5!UBERON:0003513;1.78e-29;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.48e-40,5;UBERON:0001533,1.48e-40,5;UBERON:0003513,1.78e-29,7;UBERON:0004573,1.82e-07,33;UBERON:0004571,1.82e-07,33 | |||
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|short_description=p2@LINC00161 | |short_description=p2@LINC00161 | ||
}} | }} |
Latest revision as of 00:12, 18 September 2015
Short description: | p2@LINC00161 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00161_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000412526, ENST00000455939, NR_026552, NR_026553, uc002ymm.2, uc002ymn.2_5end |
EntrezGene: | LINC00161 |
HGNC: | 17138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.48e-40 | 5 |
vascular associated smooth muscle cell | 1.18e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.48e-40 | 5 |
subclavian artery | 1.48e-40 | 5 |
trunk blood vessel | 1.78e-29 | 7 |
systemic artery | 1.82e-07 | 33 |
systemic arterial system | 1.82e-07 | 33 |