FFCP PHASE1:Hg19::chr21:40693544..40693556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54014 | |EntrezGene=54014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12760 | |HGNC=12760 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000470108_5end | |association_with_transcript=-59bp_to_ENST00000470108_5end | ||
|cluster_id=chr21:40693544..40693556,- | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_12_at_BRWD1_5end | |description=CAGE_peak_12_at_BRWD1_5end | ||
|id=chr21:40693544..40693556,- | |id=chr21:40693544..40693556,- | ||
|ontology_enrichment_celltype=CL:0002541!9.85e-16!3;CL:0000197!8.70e-13!6;CL:0000098!8.70e-13!6;CL:0002167!8.70e-13!6;CL:0000039!4.64e-11!7;CL:0000586!4.64e-11!7;CL:1000415!1.39e-10!2;CL:0002537!1.94e-09!5;CL:0002166!2.41e-07!3 | |ontology_enrichment_celltype=CL:0002541!9.85e-16!3;CL:0000197!8.70e-13!6;CL:0000098!8.70e-13!6;CL:0002167!8.70e-13!6;CL:0000039!4.64e-11!7;CL:0000586!4.64e-11!7;CL:1000415!1.39e-10!2;CL:0002537!1.94e-09!5;CL:0002166!2.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;1.37e-13;2!CL:0002541;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.21e-13,2;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.45e-26;1!UBERON:0000358;5.93e-26;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:178;9.79e-26;1!DOID:326;9.79e-26;1!DOID:3978;9.79e-26;1!DOID:3394;9.79e-26;1!DOID:5844;9.79e-26;1!DOID:114;1.37e-13;2!DOID:1287;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,9.79e-26,1;DOID:326,9.79e-26,1;DOID:3978,9.79e-26,1;DOID:3394,9.79e-26,1;DOID:5844,9.79e-26,1;DOID:114,1.37e-13,2;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.15e-21!14;UBERON:0000158!1.15e-21!14;UBERON:0000476!9.85e-16!3;UBERON:0000920!9.85e-16!3;UBERON:0000478!2.24e-15!24;UBERON:0003124!7.74e-12!7;UBERON:0000305!1.76e-11!7;UBERON:0004871!4.69e-10!8;UBERON:0002110!2.49e-07!3;UBERON:0006242!2.49e-07!3;UBERON:0004923!9.09e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.48e-10;24!UBERON:0002110;1.67e-09;3!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3!UBERON:0001987;1.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.79e-15,7;UBERON:0000478,5.57e-10,24;UBERON:0002110,1.54e-09,3;UBERON:0006242,1.54e-09,3;UBERON:0000920,1.81e-09,3;UBERON:0005631,4.66e-08,14;UBERON:0000158,4.66e-08,14;UBERON:0001987,1.31e-07,4;UBERON:0004340,1.31e-07,4 | |||
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|short_description=p12@BRWD1 | |short_description=p12@BRWD1 | ||
}} | }} |
Latest revision as of 11:07, 18 September 2015
Short description: | p12@BRWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BRWD1_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | -59bp_to_ENST00000470108_5end |
EntrezGene: | BRWD1 |
HGNC: | 12760 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.21e-13 | 2 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.79e-15 | 7 |
extraembryonic structure | 5.57e-10 | 24 |
gallbladder | 1.54e-09 | 3 |
gall bladder primordium | 1.54e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
extraembryonic membrane | 4.66e-08 | 14 |
membranous layer | 4.66e-08 | 14 |
placenta | 1.31e-07 | 4 |
allantois | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 9.79e-26 | 1 |
ischemia | 9.79e-26 | 1 |
extrinsic cardiomyopathy | 9.79e-26 | 1 |
myocardial ischemia | 9.79e-26 | 1 |
myocardial infarction | 9.79e-26 | 1 |
heart disease | 1.37e-13 | 2 |
cardiovascular system disease | 1.92e-07 | 4 |