FFCP PHASE1:Hg19::chr2:177326034..177326036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:177326034..177326036,+ | |||
|description=CAGE_peak_at_chr2:177326034..177326036,+ | |description=CAGE_peak_at_chr2:177326034..177326036,+ | ||
|id=chr2:177326034..177326036,+ | |id=chr2:177326034..177326036,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.33e-09!23;CL:0005020!2.15e-09!6;CL:0002138!2.15e-09!6;CL:0005022!2.15e-09!6;CL:0002334!1.20e-08!12;CL:0000188!2.22e-08!9;CL:0000057!4.57e-08!75;CL:0000159!4.78e-07!2;CL:0002583!5.77e-07!2;CL:0002570!7.08e-07!8 | |ontology_enrichment_celltype=CL:0002620!1.33e-09!23;CL:0005020!2.15e-09!6;CL:0002138!2.15e-09!6;CL:0005022!2.15e-09!6;CL:0002334!1.20e-08!12;CL:0000188!2.22e-08!9;CL:0000057!4.57e-08!75;CL:0000159!4.78e-07!2;CL:0002583!5.77e-07!2;CL:0002570!7.08e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.87e-07;3!CL:1000428;1.87e-07;3!CL:0002144;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.93e-07,3;CL:1000428,1.93e-07,3;CL:0002144,2.19e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.27e-10!5;DOID:450!1.27e-10!5;DOID:66!1.27e-10!5;DOID:423!1.27e-10!5;DOID:0080000!1.27e-10!5;DOID:11722!1.27e-10!5;DOID:114!2.03e-07!2 | |ontology_enrichment_disease=DOID:17!1.27e-10!5;DOID:450!1.27e-10!5;DOID:66!1.27e-10!5;DOID:423!1.27e-10!5;DOID:0080000!1.27e-10!5;DOID:11722!1.27e-10!5;DOID:114!2.03e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:2513;2.71e-19;1!DOID:3451;2.48e-10;2!DOID:4159;2.48e-10;2!DOID:0060122;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.25e-19,1;DOID:3451,2.27e-10,2;DOID:4159,2.27e-10,2;DOID:0060122,2.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.99e-09!45;UBERON:0002416!3.99e-09!45;UBERON:0002097!1.50e-07!40;UBERON:0001473!4.94e-07!8;UBERON:0004536!4.94e-07!8;UBERON:0006558!4.94e-07!8 | |ontology_enrichment_uberon=UBERON:0002199!3.99e-09!45;UBERON:0002416!3.99e-09!45;UBERON:0002097!1.50e-07!40;UBERON:0001473!4.94e-07!8;UBERON:0004536!4.94e-07!8;UBERON:0006558!4.94e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.71e-19;1!UBERON:0000412;1.87e-07;3!UBERON:0001992;1.87e-07;3!UBERON:0010523;2.63e-07;3!UBERON:0001915;2.63e-07;3!UBERON:0001982;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.91e-19,1;UBERON:0000412,1.93e-07,3;UBERON:0001992,1.93e-07,3;UBERON:0010523,2.19e-07,3;UBERON:0001915,2.19e-07,3;UBERON:0001982,2.19e-07,3 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,1.70843440283719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,1.05965950579781,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0.252320850875628,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73239737313289,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0.275673144969061,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,1.5652351854352,0,0,0,0,0,0,1.19428766609585,1.20008329398946,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80705868584208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:177326034..177326036,+ | |short_description=p@chr2:177326034..177326036,+ | ||
}} | }} |
Latest revision as of 02:50, 29 July 2015
Short description: | p@chr2:177326034..177326036, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:177326034..177326036, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.93e-07 | 3 |
stem cell of epidermis | 1.93e-07 | 3 |
capillary endothelial cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.91e-19 | 1 |
dermal papilla | 1.93e-07 | 3 |
papillary layer of dermis | 1.93e-07 | 3 |
microcirculatory vessel | 2.19e-07 | 3 |
endothelium of capillary | 2.19e-07 | 3 |
capillary | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.25e-19 | 1 |
skin carcinoma | 2.27e-10 | 2 |
skin cancer | 2.27e-10 | 2 |
integumentary system cancer | 2.27e-10 | 2 |